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Job DescriptionP45463
Confidence100.00%DateThu Jan 5 12:02:41 GMT 2012
Rank7Aligned Residues276
% Identity17%Templatec3fzvC_
PDB info PDB header:transcription regulatorChain: C: PDB Molecule:probable transcriptional regulator; PDBTitle: crystal structure of pa01 protein, putative lysr family2 transcriptional regulator from pseudomonas aeruginosa
Resolution2.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  PLAKDLQVLVEIVHSGSFSAAAATLGQTPAFVTKRIQILENTLATTLLNRSARGVALTESGQRCYEHALEILTQYQRLVD
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Template Sequence  YTLRQLKYFVTTVECGSVAEASRKLYIAQPSISTAVKGLEESFGVQLFSLTPAGARFYRKAQELLRXAHEFEQN. . . . . .
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   4.....10.........20.........30.........40.........50.........60.........70.......
 
   86...90.........100.........110.........120.........130.... .....140.........150.........160..
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Query Sequence  DVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQVHFELFDR. . . QIDLVQDNIDLDIRINDEIPDYYIAHLL
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Template Sequence  . . . . . . DVIAGQIDIGCFETVAPLYLPGLIAGFRQAYPGVEIRIRDGEQQELVQGLTSGRFDLAFLYEHDLDSTIETEPL
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   91........100.........110.........120.........130.........140.........150.........160....
 
   163......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  . TKNKRILCAAPEYLQKYPQPQSLQELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGI
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Template Sequence  XPPQRPHALLPEGHRFAGQAQVSLRDLCLEPXILLDVQPSRTY. . . FVSLFEELGLTPNIAFSSPSIEXVRGXVGQGFGF
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   165....170.........180.........190.........200....... ..210.........220.........230.........240.
 
   242.......250.........260. ........270.........280.........290......
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Query Sequence  MLRSEWDVLPFLESGKLVQV. . LPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWC
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Template Sequence  SLLVTRPHSECTYDGKKVVXVDLAEPVSTSGLAAAWLKRAQLTKPARLFVDYCREQL
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   242.......250.........260.........270.........280.........290........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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