Job Description P45463 Confidence 21.08% Date Thu Jan 5 12:02:41 GMT 2012 Rank 400 Aligned Residues 35 % Identity 26% Template c2xsdC_ PDB info PDB header:transcription/dna Chain: C: PDB Molecule:pou domain, class 3, transcription factor 1; PDBTitle: crystal structure of the dimeric oct-6 (pou3f1) pou domain2 bound to palindromic more dna Resolution 2.05 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	A	K	D	L	Q	V	L	V	E	I	V	H	S	G	S	F	S	A	A	A	A	T	L	G	Q	T	P	A	F	V	T	K	R	I	Q	I	L	E
Query Conservation
Alig confidence																					.	.	.	.	.
Template Conservation																					.	.	.	.	.
Template Sequence		P	S	S	D	D	L	E	Q	F	A	K	Q	F	K	Q	R	R	I	K	.	.	.	.	.	L	G	F	T	Q	A	D	V	G	L	A	L	G	T	L	Y
Template Known Secondary structure																					.	.	.	.	.	T	T
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.						.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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