Job Description P45463 Confidence 25.72% Date Thu Jan 5 12:02:41 GMT 2012 Rank 383 Aligned Residues 42 % Identity 14% Template c1l9uH_ PDB info PDB header:transcription Chain: H: PDB Molecule:sigma factor siga; PDBTitle: thermus aquaticus rna polymerase holoenzyme at 4 a2 resolution Resolution 4.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.						.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.
Predicted Secondary structure																				.	.	.	.	.
Query SS confidence																				.	.	.	.	.
Query Sequence		M	L	N	S	W	P	L	A	K	D	L	Q	V	L	V	E	I	V	.	.	.	.	.	H	S	G	S	F	S	A	A	A	A	T	L	G	Q	T	P	A	F	V	T	K	R	I	Q	I
Query Conservation																				.	.	.	.	.
Alig confidence									.											.	.	.	.	.
Template Conservation									.
Template Sequence		A	L	S	K	L	S	E	.	R	E	A	M	V	L	K	L	R	K	G	L	I	D	G	R	E	H	T	L	E	E	V	G	A	Y	F	G	V	T	R	E	R	I	R	Q	I	E	N	K
Template Known Secondary structure			T	T	S	S		T	.	T	T	T					T	T	S	S	T	T	S	S										T	T	S		S
Template Predicted Secondary structure									.
Template SS confidence
		372	.	.	.	.	.	.		.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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