Job Description Q46840 Confidence 99.69% Date Thu Jan 5 12:35:05 GMT 2012 Rank 4 Aligned Residues 209 % Identity 15% Template c3frmF_ PDB info PDB header:structural genomics, unknown function Chain: F: PDB Molecule:uncharacterized conserved protein; PDBTitle: the crystal structure of a functionally unknown conserved protein from2 staphylococcus epidermidis atcc 12228. Resolution 2.32 Å

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		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	D	A	I	D	D	P	Q	V	F	A	A	L	F	G	A	A	E	A	W	L	K	S	Q	G	A	S	K	I	S	G	P	F	S	L	N	I	N	Q	E	S	G	L	L	I	E	G	F	D	T	P	P	C	A	M	M	P	H	G	K	P	W	Y	A	A	H	I	E	Q	L	G	Y	H	K	G	I	D	L	L
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	Y	K	T	X	P	T	X	N	Q	W	L	K	D	I	E	V	Q	K	K	X	H	L	N	Q	S	S	Y	H	L	S	F	S	F	P	A	N	E	K	I	D	E	V	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	K	I	R	E	L	G	F	Q	I	G	V	L	E	L
Template Known Secondary structure				S	S																					T	T										T	T									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.																					.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		A	W	W	M	Q	R	T	D	L	T	F	S	P	A	L	K	K	L	M	D	Q	V	R	K	K	V	T	I	R	C	I	N	R	Q	R	F	A	E	E	M	Q	I	L	R	E	I	F	N	S	G	W	Q	H	N	W	G	F	V	P	F	T	E	H	E	F	A	T	M	G	D	Q	L	K	Y	L	V	P	D	D	.
Query Conservation																																																																																	.
Alig confidence		.													.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.																											.
Template Conservation		.													.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template Sequence		.	Y	V	I	E	A	K	A	L	K	E	L	S	.	.	.	.	.	.	.	.	R	K	R	D	V	D	I	Q	L	V	S	S	N	N	I	N	D	Y	L	H	V	Y	.	.	.	.	.	.	.	.	.	.	D	A	F	A	R	P	F	G	D	S	Y	A	N	X	V	K	Q	H	I	Y	S	S	Y	N	L	D	D
Template Known Secondary structure		.										T	T		.	.	.	.	.	.	.	.				S								T	T	T									.	.	.	.	.	.	.	.	.	.	T	T	S			T	T																T	T	T	S	S
Template Predicted Secondary structure		.													.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
			100	.	.	.	.	.	.	.	.	.	110	.									.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
			241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	M	I	Y	I	A	E	I	D	S	A	P	C	A	F	I	V	G	L	P	N	I	N	E	A	I	A	D	L	N	G	S	L	F	P	F	G	W	A	K	L	L	W	R	L	K	V	S	G	V	R	T	A	R	V	P	L	M	G	V	R	D	E	Y	Q	F	S	R	I	G	P	V	I	A	L	L	L	I	E	A
Query Conservation		.
Alig confidence		.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	R	L	V	A	Y	V	N	H	Q	P	V	G	I	V	D	I	I	X	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	T	I	E	I	D	G	F	G	V	L	E	E	F	Q	H	Q	G	I	G	S	E	I	Q	A	Y	V	G	R	X
Template Known Secondary structure										T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S											G	G	G	T	T	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.																													.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		L	R	D	P	F	A	R	R	K	I	D	A	L	E	M	S	W	I	L	E	T	N	T	G	M	N	N	M	L	E	R	I	G	A	.	E	P	Y	K	R	Y	R	L	Y	E	K	Q	I
Query Conservation																																				.
Alig confidence							.	.	.	.	.	.	.	.	.																					.
Template Conservation							.	.	.	.	.	.	.	.	.
Template Sequence		A	N	E	R	P	.	.	.	.	.	.	.	.	.	V	I	L	V	A	D	G	K	D	T	A	K	D	X	Y	L	R	Q	G	Y	V	Y	Q	G	F	K	Y	H	I	L	K	E	N	I
Template Known Secondary structure		T	T	T			.	.	.	.	.	.	.	.	.							T	T		S									T													S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.										.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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