|   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | I | R | C | I | N | R | Q | R | F | A | E | E | M | Q | I | L | R | E | I | F | N | S | G | W | Q | H | N | W | G | F | V | P | F | T | E | H | E | F | A | T | M | G | D | Q | L | K | Y | L | V | P | D | D | M | I | Y | I | A | E | I | D | S | A | P | C | A | F | I | V | G | L | P | N | I | N | E | A | I | A | D |
Query Conservation |   |
  |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |
|   |   |
|
|
|   |   |   |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
Template Conservation |   |
  |
|   |   |   |   |
|
|
|   |   |   |   |   |
|
|
|
|   |   |
|   |   |   | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |
|   |
|   |   |   |
|   |
|
|
|
|   |
|
|   |   |   |   |   | . | . | . | . | . |
Template Sequence |   |
K | V | A | R | I | A | P | N | E | R | D | A | A | R | R | I | V | R | T | T | Y | E | A | Q | . |
. |
. |
. |
. |
G | Y | A | I | D | E | S | F | A | T | F | L | E | . |
. |
. |
. |
. |
. |
. |
G | P | S | A | T | T | F | G | L | F | N | G | E | V | L | Y | G | T | I | S | I | I | N | D | G | A | . |
. |
. |
. |
. |
Template Known Secondary structure |   |
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | T |
|
|
|
| T |  |  |  |  |  |  |  | . | . | . | . | . | . | . | S | T | T |  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  | S | S | S | . | . | . | . | . |
Template Predicted Secondary structure |   |
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
|
|
|
|
. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
|
|
|
|
  |
  |   |
268 | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | |
|
|
. | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | N | G | S | L | F | P | F | G | W | A | K | L | L | W | R | L | K | V | S | G | V | R | T | A | R | V | P | L | M | G | V | R | D | E | Y | Q | F | S | R | . |
. |
. |
I | G | P | V | I | A | L | L | L | I | E | A | L | R | D | P | F | A | R | R | K | I | D | A | L | E | M | S | W | I | L | E | T | N | T | G | M |
Query Conservation |   |
  |   |
|   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|
|   |
|
|   |
| . | . | . |
|
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |
|   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
Template Conservation |   |
. |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |
|
|   |
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
| . | . | . | . | . | . | . | . |   |
|   |   |
Template Sequence |   |
. |
Q | G | L | P | M | D | S | I | Y | A | V | E | L | A | A | W | R | G | E | G | K | K | L | A | E | V | V | Q | F | A | M | D | E | A | V | A | G | K | P | S | P | F | E | A | A | S | L | F | T | M | V | L | T | Y | A | L | E | T | H | I | D | Y | L | C | I | S | I | . |
. |
. |
. |
. |
. |
. |
. |
N | P | K | H |
Template Known Secondary structure |   |
. | S |
|
| G | G | G | G | T |
|  |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |
|
|
| S |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
| T | T | S |
Template Predicted Secondary structure |   |
. |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 140 |
  |
  |   |
345 | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | N | M | L | E | R | I | G | A | E | P | Y | K | R | Y | R | L | Y |
Query Conservation |   |
  |   |
|   |
|   |
|
|   |   |   |   |
|   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|
|
|
|   |   |   |
|
|   |
|   |
|
Template Sequence |   |
D | T | F | Y | S | L | L | G | F | T | Q | I | G | A | L | K | H | Y |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . |
  |