Job Description Q46840 Confidence 98.79% Date Thu Jan 5 12:35:05 GMT 2012 Rank 137 Aligned Residues 279 % Identity 11% Template c1lrzA_ PDB info PDB header:antibiotic inhibitor Chain: A: PDB Molecule:factor essential for expression of methicillin PDBTitle: x-ray crystal structure of staphylococcus aureus fema Resolution 2.10 Å

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		45	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure												.																											.	.
Query SS confidence												.																											.	.
Query Sequence		I	W	Q	A	W	V	A	K	K	A	.	G	Q	I	V	G	R	I	T	A	Q	I	D	T	L	H	R	E	R	Y	G	K	D	T	G	H	F	.	.	G	M	I	D	A	I	D	D	P	Q	V	F	A	A	L	F	G	A	A	E	A	W	L	K	S	Q	G	A	S	K	I	S	G	P	F	S	L	N	I	N	Q
Query Conservation												.																											.	.
Alig confidence												.																.	.	.									.	.																																	.	.
Template Conservation																												.	.	.																																											.	.
Template Sequence		E	T	H	L	V	G	I	K	N	N	N	N	E	V	I	A	A	C	L	L	T	A	V	P	V	M	.	.	.	K	V	F	K	Y	F	Y	S	N	R	G	P	V	I	D	Y	E	N	Q	E	L	V	H	F	F	F	N	E	L	S	K	Y	V	K	K	H	R	C	L	Y	L	H	.	.	I	D	P	Y	L	P	Y
Template Known Secondary structure											T	T	S														T	.	.	.	T	T							T	T						T	T																		T	T	T						.	.
Template Predicted Secondary structure																												.	.	.																																											.	.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.											.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.									.	.	.	.	180	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Query Sequence		E	S	G	L	L	I	E	G	F	D	T	P	P	C	A	M	M	P	H	G	K	P	W	Y	A	A	H	I	E	Q	L	G	Y	H	K	G	.	.	.	.	.	.	.	.	.	.	I	D	L	L	A	W	W	M	Q	R	T	D	L	T	F	S	P	A	.	.	.	.	.	.	.	.	L	K	K	L	M	D	Q	V
Query Conservation																																						.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.
Template Sequence		Q	Y	L	.	.	.	.	.	.	N	H	D	G	E	I	T	G	N	A	G	N	D	W	F	F	D	K	M	S	N	L	G	F	E	H	T	G	F	H	K	G	F	D	P	V	L	Q	I	R	Y	H	S	V	L	D	L	K	D	K	T	A	D	D	I	I	K	N	M	D	G	L	R	K	R	N	T	K	K	V	K
Template Known Secondary structure					.	.	.	.	.	.		T	T	S							S		T									T	T									S			S	S	S			S								T	T									T	S
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		114	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	K	V	T	I	R	C	I	N	R	Q	R	F	A	E	E	M	Q	I	L	R	E	I	F	N	S	G	W	Q	H	N	W	G	F	V	P	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	N	G	V	K	V	R	F	L	S	E	E	E	L	P	I	F	R	S	F	M	D	D	K	F	Y	Y	N	R	L	K	Y	Y	K	D	R	V	L	V	P	L	A	Y	I	N	F	D	E	Y	I	K	E	L	N	E	E	R	D	I	L	N	K	D	L	N	K	A	L	K	D	I	E	K	R	P	E	N	K	K	A
Template Known Secondary structure		T	S	S								G	G	G																					G	G	G																																							T	T
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
					222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	T	E	H	E	F	A	T	M	G	D	Q	L	K	Y	L	V	P	D	D	M	I	Y	I	A	E	I	D	S	A	P	C	A	F	I	V	G	L	P	N	I	N	E	A	I	A	D	L	N	G	S	L	F	P	F	G	W	A	K	L	L	W	R	L	K	V	S	G	V	R	T	A	R	V	P	L	M	G
Query Conservation		.	.	.
Alig confidence		.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	N	K	R	D	N	L	Q	Q	Q	L	D	A	N	E	Q	K	I	E	E	G	K	R	L	Q	E	E	H	G	N	E	L	P	I	S	A	G	F	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	P	F	E	V	V	Y	Y	A	G	G
Template Known Secondary structure																															S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.																													320	.	.	.	.	.	.	.	.	.	330	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.							.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.	.	.
Query SS confidence																																									.	.	.	.	.	.
Query Sequence		V	R	D	E	Y	Q	F	S	R	I	G	P	V	I	A	L	L	L	I	E	A	L	R	D	P	F	A	R	R	K	I	D	A	L	E	M	S	W	I	.	.	.	.	.	.	L	E	T	N	T	G	M	N	N	M	L	E	R	I	G	A	E	P	Y	K	R	Y	R	L	Y	E	K	Q	I
Query Conservation																																									.	.	.	.	.	.
Alig confidence																										.	.	.	.												.	.	.	.	.	.
Template Conservation																										.	.	.	.
Template Sequence		T	S	N	A	F	R	H	F	A	G	S	Y	A	V	Q	W	E	M	I	N	Y	A	L	N	.	.	.	.	H	G	I	D	R	Y	N	F	Y	G	V	S	G	K	F	T	E	D	A	E	D	A	G	V	V	K	F	K	K	G	Y	N	A	E	I	I	E	Y	V	G	D	F	I	K	P	I
Template Known Secondary structure				G	G	G	G	G	G																	.	.	.	.	T	T											S			S	T	T		T	T									T	T	T														S
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.					.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions