Job Description P36943 Confidence 94.67% Date Wed Jan 25 15:20:51 GMT 2012 Rank 1 Aligned Residues 121 % Identity 10% Template d1t16a_ SCOP info Transmembrane beta-barrels Porins Outer membrane protein transport protein Resolution 2.60

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.																						.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		I	G	F	G	W	R	H	F	S	G	N	D	W	M	A	G	V	N	T	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	D	L	S	R	S	H	T	R	I	G	V	G	A	E	Y	.	W	R	D	Y	L	K	L	S	A	N	G	Y	I	R	A	S	G	W	K	K
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		W	E	V	S	G	Y	N	R	V	D	P	Q	W	A	I	H	Y	S	L	A	Y	T	S	W	S	Q	F	Q	Q	L	K	A	T	S	T	S	G	D	T	L	F	Q	K	H	E	G	F	K	D	A	Y	R	I	A	L	G	T	T	Y	Y	Y	D	D	N	W	T	F	R	T	G	I	A	F	D	D	S	P	V	P	A
Template Known Secondary structure												T	T												G	G	G									T	T	S																									S	S	S													S	S		T
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.				.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.
Query SS confidence																																																		.	.	.
Query Sequence		S	P	D	I	E	D	Y	Q	E	R	P	A	N	G	W	D	I	R	A	E	G	Y	L	P	A	W	P	Q	L	G	A	S	L	M	Y	E	Q	Y	Y	G	D	E	V	G	L	F	G	K	.	.	.	D	K	R	Q	K	D	P	H	A	I	S	A	E	V	T	Y	T
Query Conservation																																																		.	.	.
Alig confidence																									.	.																								.	.	.
Template Conservation																									.	.
Template Sequence		Q	N	R	S	I	S	I	P	D	Q	D	R	F	W	L	S	A	G	T	T	Y	A	F	.	.	N	K	D	A	S	V	D	V	G	V	S	Y	M	H	G	Q	S	V	K	I	N	E	G	P	Y	Q	F	E	S	E	G	K	A	W	L	F	G	T	N	F	N	Y	A
Template Known Secondary structure		T	T			S	S	S																S	.	.	S	S	S																				T	T
Template Predicted Secondary structure																									.	.
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.			.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions