Job Description P36943 Confidence 60.50% Date Wed Jan 25 15:20:51 GMT 2012 Rank 11 Aligned Residues 126 % Identity 12% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																						.										.	.	.	.	.
Query SS confidence																																						.										.	.	.	.	.
Query Sequence		T	D	D	R	T	Q	S	N	I	G	F	G	W	R	H	F	S	G	N	D	W	M	A	G	V	N	T	F	I	D	H	D	L	S	R	S	.	H	T	R	I	G	V	G	A	E	.	.	.	.	.	Y	W	R	D	Y	L	K	L	S	A	N	G	Y	I	R	A	S	G	W	K	K	S	P	D	I	E	D	Y	Q
Query Conservation																																						.										.	.	.	.	.
Alig confidence																.																						.										.	.	.	.	.
Template Conservation																.
Template Sequence		S	A	K	G	F	S	P	R	I	S	A	G	Y	R	.	I	N	D	L	R	F	A	V	D	Y	T	R	Y	K	N	Y	K	A	P	S	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	Q	S	P	V	K	P	Y	L	G	A	R	L	S	L	N	R	A	S	V	D	L	G	G	S	D	S	F
Template Known Secondary structure																.		T	T													S	S			S	S																		S	S	S																			T	T
Template Predicted Secondary structure																.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	P	A	N	G	W	D	I	R	A	E	G	Y	L	P	A	W	P	Q	L	G	A	S	L	M	Y	E	Q	Y	Y	G	D	E	V	G	L	F	G	K	D	K	R	Q	K	D	P	H	A	I	S	A	E	V	T	Y	T
Query Conservation
Alig confidence																																						.	.	.	.
Template Conservation																																						.	.	.	.
Template Sequence		S	Q	T	S	I	G	L	G	V	L	T	G	V	S	Y	A	V	T	P	N	V	D	L	D	A	G	Y	R	Y	N	Y	I	G	K	V	N	.	.	.	.	T	V	K	N	V	R	S	G	E	L	S	A	G	V	R	V	K
Template Known Secondary structure																				T	T																T	.	.	.	.	T
Template Predicted Secondary structure																																						.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions