Job Description P36943 Confidence 88.60% Date Wed Jan 25 15:20:51 GMT 2012 Rank 4 Aligned Residues 126 % Identity 17% Template d1i78a_ SCOP info Transmembrane beta-barrels OMPT-like Outer membrane protease OMPT Resolution 2.60

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																					.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	D	D	R	T	Q	S	N	I	G	F	G	W	R	H	F	S	G	N	D	W	M	A	G	V	N	T	F	I	D	H	D	L	S	R	S	H	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	G	V	G	A	E	Y	W	R	D	Y	L	K	L	S	A	N	G	Y	I	R
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																																																								.	.
Template Sequence		N	E	P	N	Y	R	L	G	L	M	A	G	Y	Q	E	S	R	Y	S	F	T	A	R	G	G	S	Y	I	Y	S	S	E	E	G	F	R	D	D	I	G	S	F	P	N	G	E	R	A	I	G	Y	K	Q	R	F	K	M	P	Y	I	G	L	T	G	S	Y	R	Y	E	D	.	.	F	E	L	G	G	T	F	K
Template Known Secondary structure				S	S																									B			T	T		S	S		B			B			T	T		S																						T	T	.	.
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.												.	.	.	.	.			.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.																	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.						.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.						.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	S	G	W	K	K	S	P	D	I	E	D	Y	Q	E	R	.	.	.	.	.	.	.	.	.	.	.	P	A	N	G	W	.	.	D	I	R	A	E	G	Y	L	P	A	W	P	Q	L	G	A	S	L	M	Y	E	Q	Y	Y	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	G	L
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.						.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.						.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	S	G	W	V	E	S	S	D	N	D	E	H	Y	D	P	K	G	R	I	T	Y	R	S	K	V	K	D	Q	N	Y	Y	S	V	A	V	N	A	G	Y	Y	V	T	P	N	A	K	V	Y	V	E	G	A	W	N	R	V	T	N	K	K	G	N	T	S	L	Y	D	H	N	N	N	T	S	D	Y	S	K	N	G
Template Known Secondary structure																	S	S	S																										T	T																								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G	K	D	K	R	Q	K	D	P	H	A	I	S	A	E	V	T	Y	T
Query Conservation
Alig confidence									.	.	.
Template Conservation									.	.	.
Template Sequence		A	G	I	E	N	Y	N	.	.	.	F	I	T	T	A	G	L	K	Y	T
Template Known Secondary structure									.	.	.
Template Predicted Secondary structure									.	.	.
Template SS confidence
		280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions