Job Description P36943 Confidence 37.14% Date Wed Jan 25 15:20:51 GMT 2012 Rank 19 Aligned Residues 128 % Identity 12% Template c3nb3C_ PDB info PDB header:virus Chain: C: PDB Molecule:outer membrane protein a; PDBTitle: the host outer membrane proteins ompa and ompc are packed at specific2 sites in the shigella phage sf6 virion as structural components Resolution 19.00 Å

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		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		P	T	N	M	L	F	T	Q	G	A	I	H	R	T	D	D	R	T	Q	S	N	I	G	F	G	W	R	H	F	S	G	N	D	W	M	A	G	V	N	T	F	I	D	H	D	L	S	R	S	H	T	R	I	G	V	G	A	E	Y	W	R	D	Y	L	.	.	.	K	L	S	A	N	G	Y	I	R	A	S	G	W
Query Conservation																																																																		.	.	.
Alig confidence																																																																		.	.	.
Template Conservation
Template Sequence		K	D	N	T	W	Y	T	G	A	K	L	G	W	S	Q	H	E	N	K	L	G	A	G	A	F	G	G	Y	Q	V	N	P	Y	V	G	F	E	M	G	Y	D	W	L	G	R	M	P	Y	A	Y	K	A	Q	G	V	Q	L	T	A	K	L	G	Y	P	I	T	D	D	L	D	I	Y	T	R	L	G	G	M	V	W
Template Known Secondary structure			T	T																													T	T																																S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.			.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.
Query SS confidence																	.	.
Query Sequence		K	K	S	P	D	I	E	D	Y	Q	E	R	P	A	N	.	.	G	W	D	I	R	A	E	G	Y	L	P	A	W	P	Q	L	G	A	S	L	M	Y	E	Q	Y	Y	G	D	E	V	G	L	F	G	K	D	K	R	Q	K	D	P	H	A	I	S	A	E	V	T	Y	T
Query Conservation																	.	.
Alig confidence																	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	D	T	Y	S	N	V	Y	G	K	N	H	D	T	G	V	S	P	V	F	A	G	G	V	E	Y	A	I	T	P	E	I	A	T	R	L	E	Y	Q	W	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	L	S	L	G	V	S	Y	R
Template Known Secondary structure								S	S	S																						T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																	.	.	.	.	150	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions