Return to main results Retrieve Phyre Job Id

Job DescriptionP36943
Confidence37.44%DateWed Jan 25 15:20:51 GMT 2012
Rank18Aligned Residues124
% Identity11%Templatec3aehB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170.........180........ .190.........200.........210.........220.......
Predicted Secondary structure 







.....















Query SS confidence 



































. . . . .






































Query Sequence  GAIHRTDDRTQSNIGFGWRHFSGNDWMAGVNTFIDH. . . . . DLSRSHTRIGVGAEYWRDYLKLSANGYIRASGWKKSPDI
Query Conservation 


   
 
   




 
       


 
 


 .....
 
  
 
 


 
   
 
 
 

 
  

 
  
   
Alig confidence 



































.....


































...
Template Conservation                
 

   
     
 
   
 
          
     
                       ...
Template Sequence  GKQNFRSHSLYAGAEVGYRYHLTDTTFVEPQAELVWGRLQGQNSVNPLVGRTGVVSGKTFSGKDWSLTARAGLHYE. . . F
Template Known Secondary structure 
TT




SS...
Template Predicted Secondary structure 

















...
Template SS confidence 















































































   1217..1220.........1230.........1240.........1250.........1260.........1270.........1280.........1290.. .
 
   228.230.........240.........250.........260.........270.........280........
Predicted Secondary structure 


























Query SS confidence 




























































Query Sequence  EDYQERPANGWDIRAEGYLPAWPQLGASLMYEQYYGDEVGLFGKDKRQKDPHAISAEVTYT
Query Conservation   

 



 
 

     

  






 



 

 
 


    
 

 
 
 

 

Alig confidence 







































.........











Template Conservation                

          
        
    .........       



 
Template Sequence  DLTDSRKDSRMLYGVGLNARFGDNTRLGLEVERSAFGKYN. . . . . . . . . TDDAINANIRYS
Template Known Secondary structure  S


TTTS
SS.........
Template Predicted Secondary structure 
















.........
Template SS confidence 




























































   13091310.........1320.........1330.........1340........ .1350.........1360
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions