 |
| Job Description | P36943 | | Confidence | 3.45% | Date | Wed Jan 25 15:20:51 GMT 2012 |
| Rank | 64 | Aligned Residues | 29 |
| % Identity | 10% | Template | c2bpsA_ |
| PDB info |
PDB header:ubiquitin | Chain: A: PDB Molecule:yukd protein; |
PDBTitle: ubiquitin-like protein yukd of bacillus subtilis
|
| Resolution | 2.7 Å |
|
| | |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | |  |
|
|
|
|
|
|
|
|
| | | | | | | | | | |
|
|
| | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
V | K | L | N | V | D | K | D | F | S | L | K | D | S | S | L | E | M | L | Y | P | I | Y | D | T | P | T | N | M | L |
| Query Conservation | |
| |
| | |
| | | | | | | |
| | |
|
|
| |
|
|
|
| | | | |
| |
| Alig confidence | |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| |
|
|
|
| | . | | |
|
|
| | | |
|
|
|
| | | | | |
|
| |
|
|
| Template Sequence | |
I | D | I | T | I | D | L | . |
K | H | Y | N | G | S | V | F | D | L | R | L | S | D | Y | H | P | V | K | K | V | I |
| Template Known Secondary structure | |
| | | | | |
| . | T | T | T | T |
|
| | | | | | | | T | T | S | B | T | T |  | | |
| Template Predicted Secondary structure | |
| | | | | | | . | | |
|
|
|
| | | | | | |
|
| | | | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
3 | . | . | . | . | . | . | |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
