Return to main results Retrieve Phyre Job Id

Job DescriptionP36943
Confidence6.16%DateWed Jan 25 15:20:51 GMT 2012
Rank37Aligned Residues134
% Identity17%Templatec1fw3A_
PDB info PDB header:hydrolase, membrane proteinChain: A: PDB Molecule:outer membrane phospholipase a; PDBTitle: outer membrane phospholipase a from escherichia coli
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   140..... ....150.........160.... .....170.........180.........190.........200.........210.......
Predicted Secondary structure 

.





.








Query SS confidence 





.


















.




















































Query Sequence  PIYDTP. TNMLFTQGAIHRTDDRTQS. NIGFGWRHFSGNDWMAGVNTFIDHDLSRSHTRIGVGAEYWRDYLKLSANGYIR
Query Conservation 



  .  
 





   
 
   .




 
       


 
 


 
 
  
 
 


 
   
 
 
 

 
  
Alig confidence 





.


















.








.


.........






























Template Conservation 






 



          
        
  

.


.........    







     
 
      
 
 
Template Sequence  PFRETNYEPQLFLGFATDYRFAGWTLRDVEMGYNHD. NGR. . . . . . . . . SDPTSRSWNRLYTRLMAENGNWLVEVKPWYV
Template Known Secondary structure 
TT
.


.........
TTT



TT
Template Predicted Secondary structure 

















.


.........









Template SS confidence 















































































   108.110.........120.........130.........140... ... ...150.........160.........170.......
 
   218.220.........230. ........240.........250.........260.........270.....
Predicted Secondary structure 












......................


















Query SS confidence 













. . . . . . . . . . . . . . . . . . . . . .











































Query Sequence  ASGWKKSPDIEDYQ. . . . . . . . . . . . . . . . . . . . . . ERPANGWDIRAEGYLPAWPQLGASLMYEQYYGDEVGLFGKDKRQ
Query Conservation 

 
  
    

 ......................



 
 

     

  






 



 

 
 


    
Alig confidence 













......................

































..







Template Conservation 
 
 





 

 

 

   
          

 
     




  



   
  
 


 




..




   
Template Sequence  VGNTDDNPDITKYMGYYQLKIGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGES. . LIDYNFNQ
Template Known Secondary structure  S

TTSTT
STTTTTTSSSS
S
SS..STTTT

Template Predicted Secondary structure 



























..





Template SS confidence 















































































   179180.........190.........200.........210.........220.........230.........240........ .250......
 
   276...280........
Predicted Secondary structure 




Query SS confidence 












Query Sequence  KDPHAISAEVTYT
Query Conservation   

 
 
 

 

Alig confidence  ...









Template Conservation  ... 





 
 
Template Sequence  . . . TRVGVGVMLN
Template Known Secondary structure  ...S
Template Predicted Secondary structure  ...
Template SS confidence 












   257..260......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions