 |
Job Description | P43667 | Confidence | 2.20% | Date | Thu Jan 5 12:02:23 GMT 2012 |
Rank | 24 | Aligned Residues | 35 |
% Identity | 26% | Template | c2ww9B_ |
PDB info |
PDB header:ribosome | Chain: B: PDB Molecule:protein transport protein sss1; |
PDBTitle: cryo-em structure of the active yeast ssh1 complex bound to the2 yeast 80s ribosome
|
Resolution | 8.60 Å |
|
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | A | P | E | V | M | H | D | T | R | R | F | V | P | T | L | V | G | F | A | V | L | G | A | S | F | Y | K | T | R | S | I | I | I | P |
Query Conservation |   |
|
|
|   |
|   |   |
|   |   |
|   |   |
|   |
|   |
|
|
|
|
|   |
|   |
|   |
|   |
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|   |   |
|   |   |
|   |   |
|
|
|   |
|
|
|   |
|
|
|   |
|
|
|
|
|
|
|
Template Sequence |   |
K | K | P | D | L | K | E | Y | T | K | I | V | K | A | V | G | I | G | F | I | A | V | G | I | I | G | Y | A | I | K | L | I | H | I | P |
Template Known Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|