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Job DescriptionP0CF63
Confidence99.83%DateWed Jan 25 15:20:36 GMT 2012
Rank3Aligned Residues154
% Identity18%Templatec1c0mA_
PDB info PDB header:transferaseChain: A: PDB Molecule:protein (integrase); PDBTitle: crystal structure of rsv two-domain integrase
Resolution2.53 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   125....130.........140.........150.........160.........170.........180.........190.........200....
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Query Sequence  RVAVKESNQRWCSDGFEFCCDNGERLRVTFALDCCDREALHWAVTTGGFNSETVQDVMLGAVERRFGNDLPSSPVEWLTD
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Template Sequence  NPRGLGPLQIWQTDFTLEP. RMAPRSWLAVTVDTASSAIVVTQHGRVTSVAVQHHWATAIAVL. . . . . . . . GRPKAIKTD
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   51........60......... 70.........80.........90.........100.........110.. .......120.
 
   205....210.........220.........230.........240.........250... ......260.........270........
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Query Sequence  NGSCYRANETRQFARMLGLEPKNTAVRSPESNGIAESFVKTIKRDYISI. . . . . . MPKPDGLTAAKNLAEAFEHYNEWHP
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Template Sequence  NGSCFTSKSTREWLARWGIAHTTGIPGNSQGQAMVERANRLLKDRIRVLAEGDGFMKRIPTSKQGELLAKAMYALN. . HK
Template Known Secondary structure  S
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   122.......130.........140.........150.........160.........170.........180.........190....... ..
 
   279280.........
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Query Sequence  HSALGYRSPRE
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Template Sequence  ERGENTKTPIQ
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   200.........210
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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