Job Description P0AFT8 Confidence 3.94% Date Thu Jan 5 11:27:14 GMT 2012 Rank 83 Aligned Residues 38 % Identity 11% Template d2v7fa1 SCOP info DNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Rps19E-like Resolution 1.15

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	D	E	Q	Q	R	C	K	I	F	T	S	P	L	R	P	K	V	C	A	G	L	Q	A	S	A	E	M	C	G	N	S	R	Q	Q	A	M	T	W	L	I	D	L	E	M	L
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.						.
Template Conservation															.	.	.	.	.	.	.	.						.
Template Sequence		P	V	G	I	E	R	L	R	T	Y	Y	G	G	.	.	.	.	.	.	.	.	G	H	A	P	E	.	R	F	Y	K	A	G	G	S	I	I	R	K	A	L	Q	Q	L	E	A	A
Template Known Secondary structure		S	B												.	.	.	.	.	.	.	.				T	T	.	S																			T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.						.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.									80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions