Job Description P0AES4 Confidence 20.98% Date Thu Jan 5 11:24:06 GMT 2012 Rank 62 Aligned Residues 59 % Identity 8% Template c3ocmB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:putative membrane protein; PDBTitle: the crystal structure of a domain from a possible membrane protein of2 bordetella parapertussis Resolution 1.80 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.						.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110
Predicted Secondary structure																																					.	.	.	.	.																																.
Query SS confidence																																					.	.	.	.	.																																.
Query Sequence		L	K	P	V	H	R	R	V	L	Y	A	M	N	V	L	G	N	D	W	N	K	A	Y	K	K	S	A	R	V	V	G	D	V	I	G	.	.	.	.	.	K	Y	H	P	H	G	D	S	A	V	Y	D	T	I	V	R	M	A	Q	P	F	S	L	R	Y	M	L	V	D	G	Q	.	G	N	F	G
Query Conservation																																					.	.	.	.	.																																.
Alig confidence																			.	.	.	.	.	.	.	.	.	.									.	.	.	.	.				.																												.
Template Conservation																			.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		F	G	V	E	E	R	N	X	V	S	G	V	L	T	L	A	E	.	.	.	.	.	.	.	.	.	.	R	S	I	R	S	I	X	T	P	R	T	D	V	S	W	V	.	N	I	D	D	D	A	A	T	I	R	Q	Q	L	T	A	A	P	H	S	F	F	P	V	C	R	G	S	L	D	E	V	V
Template Known Secondary structure														T	T	G	G	G	.	.	.	.	.	.	.	.	.	.	S						S			G	G	G					.		T	T	S												S			S						S	S	S	T	T	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.											.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions