Job Description P0AES4 Confidence 33.46% Date Thu Jan 5 11:24:06 GMT 2012 Rank 44 Aligned Residues 152 % Identity 12% Template c3mkqA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:coatomer beta'-subunit; PDBTitle: crystal structure of yeast alpha/betaprime-cop subcomplex of the copi2 vesicular coat Resolution 2.50 Å

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		629	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.		.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		E	R	I	T	A	I	L	P	V	T	E	F	E	E	G	V	K	V	F	M	A	T	A	N	G	T	V	K	K	T	V	L	T	E	F	N	R	L	R	T	A	G	K	V	A	I	K	L	V	D	.	G	D	E	L	I	G	V	D	L	T	S	G	E	D	E	V	M	L	F	S	A	E	G	K	V	V	R	F	K
Query Conservation																																																				.
Alig confidence										.	.	.																						.	.	.	.	.	.	.												.
Template Conservation										.	.	.																						.	.	.	.	.	.	.
Template Sequence		D	R	V	K	G	I	D	F	.	.	.	H	P	T	E	P	W	V	L	T	T	L	Y	S	G	R	V	E	I	W	N	Y	.	.	.	.	.	.	.	E	T	Q	V	E	V	R	S	I	Q	V	T	E	T	P	V	R	A	G	K	F	I	A	R	K	N	W	I	I	V	G	S	D	D	F	R	I	R	V	F	N
Template Known Secondary structure		S								.	.	.		S	S	S	S							T	T	S							T	.	.	.	.	.	.	.	T	T	T										S	S									G	G	G	T							T	T	S
Template Predicted Secondary structure										.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		708	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.		.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		E	S	S	V	R	A	M	G	C	N	T	T	G	V	R	G	I	R	L	G	.	E	G	D	K	V	V	S	L	I	V	P	R	G	D	G	A	I	L	T	A	T	Q	N	G	Y	G	K	R	T	A	V	A	E	Y	P	T	K	S	R	A	T	K	G	V	I	S	I	K	V	T	E	R	N	G	L	V	V	G	A
Query Conservation																						.
Alig confidence					.	.	.	.	.	.	.	.	.									.																																	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template Sequence		Y	N	T	.	.	.	.	.	.	.	.	.	G	E	K	V	V	D	F	E	A	H	P	D	Y	I	R	S	I	A	V	H	P	T	K	P	Y	V	L	S	G	S	D	D	L	T	V	K	L	W	N	W	E	.	.	.	.	.	.	.	.	N	N	W	A	L	E	Q	T	F	E	G	H	E	H	F	V	M	C	V
Template Known Secondary structure		T	T	T	.	.	.	.	.	.	.	.	.											S	S									S	S	S	S							T	T	S							G	G	.	.	.	.	.	.	.	.	G	T	S										S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.										.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.									.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		787	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	V	D	D	C	D	Q	I	M	M	I	T	D	A	G	T	L	V	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	N	P	K	D	P	S	T	F	A	S	G	C	L	D	R	T	V	K	V
Template Known Secondary structure					T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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