Job Description P0AES4 Confidence 73.65% Date Thu Jan 5 11:24:06 GMT 2012 Rank 23 Aligned Residues 234 % Identity 15% Template c3dm0A_ PDB info PDB header:sugar binding protein,signaling protein Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with PDBTitle: maltose binding protein fusion with rack1 from a. thaliana Resolution 2.40 Å

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		532	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.		.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		D	L	I	T	Q	E	D	V	V	V	T	L	S	H	Q	G	Y	V	K	Y	Q	P	L	S	E	Y	E	A	Q	R	R	G	G	K	G	K	S	A	A	R	I	K	.	E	E	D	F	I	D	R	L	L	V	A	N	T	H	D	H	I	L	C	F	S	S	R	G	R	V	Y	S	M	K	V	Y	Q	L	P	E	A
Query Conservation																																												.
Alig confidence																											.	.	.	.	.	.	.	.	.									.																																	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template Sequence		V	L	S	S	D	G	Q	F	A	L	S	G	S	W	D	G	E	L	R	L	W	D	L	A	A	.	.	.	.	.	.	.	.	.	G	V	S	T	R	R	F	V	G	H	T	K	D	V	L	S	V	A	F	S	L	D	N	R	Q	I	V	S	A	S	R	D	R	T	I	K	L	W	N	T	L	.	.	.	.	.
Template Known Secondary structure					T	T	S	S							T	T	S							T	T	T	.	.	.	.	.	.	.	.	.	T										S	S									T	T	S	S							T	T	S							T	T	.	.	.	.	.
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																																										.	.	.	.	.
Template SS confidence
		1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.										.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.		.	680	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		T	R	G	A	R	G	R	P	I	V	N	L	L	P	L	E	Q	D	E	R	I	T	A	I	L	P	V	T	E	F	E	E	G	V	K	V	F	M	A	T	A	N	G	T	V	K	K	T	V	L	T	E	F	N	R	L	R	T	A	G	K	V	A	I	K	L	V	D	.	G	D	E	L	I	G	V	D	L	T	S
Query Conservation																																																																						.
Alig confidence		.	.	.	.																																															.	.	.	.	.	.	.												.
Template Conservation		.	.	.	.																																															.	.	.	.	.	.	.
Template Sequence		.	.	.	.	G	E	C	K	Y	T	I	S	E	G	G	E	G	H	R	D	W	V	S	C	V	R	F	S	P	N	T	L	Q	P	T	I	V	S	A	S	W	D	K	T	V	K	V	W	N	L	.	.	.	.	.	.	.	S	N	C	K	L	R	S	T	L	A	G	H	T	G	Y	V	S	T	V	A	V	S	P
Template Known Secondary structure		.	.	.	.	S								S	S	T	T	S		S	S									S		S	S	S								T	T	S							T	.	.	.	.	.	.	.	T	T											S	S									T
Template Predicted Secondary structure		.	.	.	.																																															.	.	.	.	.	.	.
Template SS confidence
						1136	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.								.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.
		690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	D	E	V	M	L	F	S	A	E	G	K	V	V	R	F	K	E	S	S	V	R	A	M	G	C	N	T	T	G	V	R	G	I	R	L	G	E	G	D	K	V	V	S	L	I	V	P	R	G	D	G	A	I	L	T	A	T	Q	N	G	Y	G	K	R	T	A	V	A	E	Y	P	T	K	S	R	A	T	K
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template Sequence		D	G	S	L	C	A	S	G	G	K	D	G	V	V	L	L	W	D	L	A	E	G	.	.	.	.	.	.	.	.	.	.	K	K	L	Y	S	L	E	A	N	S	V	I	H	A	L	C	F	S	P	N	R	Y	W	L	C	A	A	T	E	H	G	I	K	I	W	D	L	.	.	.	.	.	.	.	E	S	K	S
Template Known Secondary structure		T	S	S							T	T	S	B						T	T	T	T	.	.	.	.	.	.	.	.	.	.							B		S	S									S	S	S	S							T	T							T	.	.	.	.	.	.	.	T	T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.
Template SS confidence
		1205	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.											.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.								.	.	.	.
		770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	S	I	K	V	T	E	R	N	G	L	V	V	G	A	V	Q	V	D	D	C	D	Q	I	M	M	I	T	D	A	G	T	L	V	R	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	E	D	L	K	V	D	L	K	K	V	I	Y	C	T	S	L	N	W	S	A	D	G	S	T	L	F	S	G	Y	T	D	G	V	I	R	V
Template Known Secondary structure																							T	T	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		1268	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions