Job Description P0AES4 Confidence 100.00% Date Thu Jan 5 11:24:06 GMT 2012 Rank 8 Aligned Residues 479 % Identity 41% Template c2xkjE_ PDB info PDB header:isomerase Chain: E: PDB Molecule:topoisomerase iv; PDBTitle: crystal structure of catalytic core of a. baumannii topo iv2 (pare-parc fusion truncate) Resolution 2.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	V	N	I	E	E	E	L	K	S	S	Y	L	D	Y	A	M	S	V	I	V	G	R	A	L	P	D	V	R	D	G	L	K	P	V	H	R	R	V	L	Y	A	M	N	V	L	G	N	D	W	N	K	A	Y	K	K	S	A	R	V	V	G	D	V	I	G	K	Y	H	P	H	G	D	S	A	V	Y	D	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	N	R	S	V	A	E	F	T	E	Q	A	Y	L	N	Y	A	M	Y	V	I	M	D	R	A	L	P	H	I	S	D	G	L	K	P	V	Q	R	R	I	V	Y	A	M	S	E	L	G	L	K	S	S	G	K	P	K	K	S	A	R	T	V	G	D	V	L	G	K	Y	H	P	H	G	D	S	A	C	Y	E	A
Template Known Secondary structure																										T			B	T	T	T	S															T	T			T	T	S																T			S
Template Predicted Secondary structure
Template SS confidence
		1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		I	V	R	M	A	Q	P	F	S	L	R	Y	M	L	V	D	G	Q	G	N	F	G	S	I	.	D	G	D	S	A	A	A	M	R	Y	T	E	I	R	L	A	K	I	A	H	E	L	M	A	D	L	E	K	E	T	V	D	F	V	D	N	Y	D	G	T	E	K	I	P	D	V	M	P	T	K	I	P	N	L	L
Query Conservation																										.
Alig confidence																										.
Template Conservation
Template Sequence		M	V	L	M	A	Q	P	F	S	Y	R	Y	P	L	I	E	G	Q	G	N	W	G	S	P	D	D	P	K	S	F	A	A	M	R	Y	T	E	A	K	L	S	A	Y	S	E	L	L	L	S	E	L	G	Q	G	T	S	E	W	Q	D	N	F	D	G	S	L	K	E	P	I	T	L	P	A	R	V	P	N	I	L
Template Known Secondary structure								T	T	T		S	S		S				S	S				B	T	T	B	T	T					T	T	T							G	G	G					T	T	T	T	T	T		S						T	T	S	S	S				S	S				S	S
Template Predicted Secondary structure
Template SS confidence
		1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure																																																												.
Query SS confidence																																																												.
Query Sequence		V	N	G	S	S	G	I	A	V	G	M	A	T	N	I	P	P	H	N	L	T	E	V	I	N	G	C	L	A	Y	I	D	D	E	D	I	S	I	E	G	L	M	E	H	I	P	G	P	D	F	P	T	A	A	I	I	N	G	.	R	R	G	I	E	E	A	Y	R	T	G	R	G	K	V	Y	I	R	A	R	A
Query Conservation																																																												.
Alig confidence																																																												.
Template Conservation
Template Sequence		L	N	G	T	T	G	I	A	V	G	M	A	T	D	I	P	P	H	N	L	R	E	V	V	K	G	T	I	A	L	I	R	N	P	Q	T	S	D	E	K	L	A	E	Y	I	P	A	P	D	L	P	T	K	A	E	I	I	T	P	P	E	E	L	L	K	I	Q	T	T	G	R	G	S	Y	R	M	R	A	V	Y
Template Known Secondary structure										T	T																								T	T												S				S	S	S																	S
Template Predicted Secondary structure
Template SS confidence
		1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																																					.															.
Query SS confidence																																																					.															.
Query Sequence		E	V	E	V	D	A	K	T	G	R	E	T	I	I	V	H	E	I	P	Y	Q	V	N	K	A	R	L	I	E	K	I	A	E	L	V	K	E	K	R	V	E	G	I	S	A	L	R	D	E	S	D	.	K	D	G	M	R	I	V	I	E	V	K	R	D	A	.	V	G	E	V	V	L	N	N	L	Y	S	Q	T
Query Conservation																																																					.															.
Alig confidence					.	.	.	.	.	.																																											.															.
Template Conservation					.	.	.	.	.	.
Template Sequence		T	I	E	.	.	.	.	.	.	K	N	E	I	V	I	T	E	L	P	Y	Q	V	S	G	S	K	V	I	T	Q	I	A	D	Q	M	Q	A	K	K	L	P	L	V	V	D	V	R	D	E	S	D	H	E	N	P	T	R	L	V	I	V	L	R	S	N	R	I	D	A	E	A	V	M	S	H	L	F	A	T	T
Template Known Secondary structure					.	.	.	.	.	.	T	T									T	T																T	T			T	T										S	S		S	S							S		T	T	S													S
Template Predicted Secondary structure					.	.	.	.	.	.
Template SS confidence
		1250	.	.							.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.		.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		Q	L	Q	V	S	F	G	I	N	M	V	A	L	.	H	H	G	Q	P	K	I	M	N	L	K	D	I	I	A	A	F	V	R	H	R	R	E	V	V	T	R	R	T	I	F	E	L	R	K	A	R	D	R	A	H	I	L	E	A	L	A	V	A	L	A	N	I	D	P	I	I	E	L	I	R	H	A	P	T	P
Query Conservation															.
Alig confidence															.																																																																		.
Template Conservation																																																																																	.
Template Sequence		D	L	E	S	S	Y	R	V	N	L	N	M	I	G	E	D	G	R	P	Q	V	K	S	I	R	R	I	L	L	E	W	I	E	I	R	K	K	T	V	T	R	R	L	Q	Y	H	L	N	R	I	E	K	R	L	H	I	L	A	G	L	L	I	A	Y	L	D	I	D	T	V	I	R	I	I	R	E	E	D	Q	.
Template Known Secondary structure		T	T													T	T	S																																																T	T												S	S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		1324	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	A	K	T	A	L	V	A	N	P	W	Q	L	G	N	V	A	A	M	L	E	R	A	G	D	D	A	A	R	P	E	W	L	E	P	E	F	G	V	R	D	G	L	Y	Y	L	T	E	Q	Q	A	Q	A	I	L	D	L	R	L	Q	K	L	T	G	L	E	H	E	K	L	L	D	E	Y	K	E	L	L	D
Query Conservation
Alig confidence		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	P	K	P	V	L	M	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	I	D	E	I	Q	A	E	A	I	L	E	L	K	L	R	H	L	A	K	L	E	E	M	E	I	R	H	E	Q	D	E	L	S	A
Template Known Secondary structure		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T												S
Template Predicted Secondary structure		.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				1403	.	.	.	.	.	.	1410																																			.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	A	E	L	L	R	I	L	G	S	A	D	R	L	M	E	V	I	R	E	E	L	E	L	V	R	E	Q	F	G	D	K	R	R	T	E	I	T	A	N	S	A	D	I	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	A	I	I	R	E	Q	L	E	N	P	E	S	L	K	N	L	I	I	S	E	L	K	E	D	A	K	K	F	G	D	E	R	R	S	P	I	V	A	R	A	E	A	V	Q	I
Template Known Secondary structure																																				S	S		B
Template Predicted Secondary structure
Template SS confidence
		1447	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.