Job Description P0AES4 Confidence 86.86% Date Thu Jan 5 11:24:06 GMT 2012 Rank 22 Aligned Residues 194 % Identity 12% Template c2oajA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:protein sni1; PDBTitle: crystal structure of sro7 from s. cerevisiae Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	E	D	V	V	V	T	L	S	H	Q	G	Y	V	K	Y	Q	P	L	S	E	Y	E	A	Q	R	R	G	G	K	G	K	S	A	A	R	I	K	E	E	D	F	I	D	R	L	L	V	A	N	T	H	D	H	I	L	C	F	S	S	R	G	R	V	Y	S	M	K	V	Y	Q	L	P	E	A	T	R	G	A
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template Sequence		F	T	Q	N	L	L	A	I	A	T	V	T	G	E	V	H	I	Y	.	.	.	.	.	.	.	.	.	.	G	Q	Q	Q	V	E	V	V	I	K	L	E	D	R	S	A	I	K	E	M	R	F	V	K	G	I	Y	L	V	V	I	N	A	K	D	T	.	.	.	V	Y	V	L	S	L	Y	S	Q	K	V	L	T
Template Known Secondary structure		T	T	T	T							T	T	S						.	.	.	.	.	.	.	.	.	.		S	T	T								S	S											T	T	T							T	T			.	.	.						T	T	T		S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.																																					.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.											.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.																	.	.	.	.	.	670	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	R	P	I	V	N	L	L	P	L	E	Q	D	E	R	I	T	A	I	L	P	V	T	E	F	E	E	G	V	K	V	F	M	A	T	A	N	G	T	V	K	K	T	V	L	T	E	F	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	R	T	A	G	K	V	A	I	K	L	V	D
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.														.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.														.	.	.
Template Sequence		T	.	.	.	.	.	.	.	.	.	V	F	V	P	G	K	I	T	S	I	D	T	D	.	.	.	A	S	L	D	W	M	L	I	G	L	Q	N	G	S	M	I	V	Y	D	I	D	R	D	Q	L	S	S	F	K	L	D	N	L	Q	K	S	S	F	F	P	A	A	R	L	S	P	I	V	S	I	Q	W	N	P
Template Known Secondary structure			.	.	.	.	.	.	.	.	.				S	S									.	.	.	T	T		S							T	T	S							T	T	T	T															T		S	S	S												T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.														.	.	.
Template SS confidence
		154										.	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		679	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	E	L	I	G	V	D	L	T	S	G	E	D	E	V	M	L	F	S	A	E	G	K	V	V	R	F	K	E	S	S	V	R	A	M	G	C	N	T	T	G	V	R	G	I	R	L	G	E	G	D	K	V	V	S	L	I	V	P	R	G	D	G	A	I	L	T	A	T	Q	N	G	Y	G	K
Query Conservation
Alig confidence							.
Template Conservation							.
Template Sequence		R	D	I	G	T	.	V	L	I	S	Y	E	Y	V	T	L	T	Y	S	L	V	E	N	E	I	K	Q	S	F	I	Y	E	L	P	P	F	A	P	G	G	D	F	S	E	K	T	N	E	K	R	T	P	K	V	I	Q	S	L	Y	H	P	N	S	L	H	I	I	T	I	H	E	D	N	S	L	V
Template Known Secondary structure		T					.						S	S							T	T	T	T										B		T	T				S	T	T				T	T	S		B											T	T	S	S							T	T
Template Predicted Secondary structure							.
Template SS confidence
		222	.	.	.	.		.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions