Job Description P0AES4 Confidence 100.00% Date Thu Jan 5 11:24:06 GMT 2012 Rank 17 Aligned Residues 286 % Identity 99% Template c1zi0A_ PDB info PDB header:isomerase, dna bindng protein Chain: A: PDB Molecule:dna gyrase subunit a; PDBTitle: a superhelical spiral in escherichia coli dna gyrase a c-2 terminal domain imparts unidirectional supercoiling bias Resolution 2.60 Å

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		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	D	V	V	V	T	L	S	H	Q	G	Y	V	K	Y	Q	P	L	S	E	Y	E	A	Q	R	R	G	G	K	G	K	S	A	A	R	I	K	E	E	D	F	I	D	R	L	L	V	A	N	T	H	D	H	I	L	C	F	S	S	R	G	R	V	Y	S	M	K	V	Y	Q	L	P	E	A	T	R	G	A	R
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	D	V	V	V	T	L	S	H	Q	G	Y	V	K	Y	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	D	F	I	D	R	L	L	V	A	N	T	H	D	H	I	L	C	F	S	S	R	G	R	V	Y	S	M	K	V	Y	Q	L	P	E	A	T	R	G	A	R
Template Known Secondary structure											T	T	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T								T	T	S							G	G	G	S					S	S	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.																					.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	P	I	V	N	L	L	P	L	E	Q	D	E	R	I	T	A	I	L	P	V	T	E	F	E	E	G	V	K	V	F	M	A	T	A	N	G	T	V	K	K	T	V	L	T	E	F	N	R	L	R	T	A	G	K	V	A	I	K	L	V	D	G	D	E	L	I	G	V	D	L	T	S	G	E	D	E	V	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	P	I	V	N	L	L	P	L	E	Q	D	E	R	I	T	A	I	L	P	V	T	E	F	E	E	G	V	K	V	F	M	A	T	A	N	G	T	V	K	K	T	V	L	T	E	F	N	R	L	R	T	A	G	K	V	A	I	K	L	V	D	G	D	E	L	I	G	V	D	L	T	S	G	E	D	E	V	M
Template Known Secondary structure					G	G	G	T	S				T	T										S				T	T								T	T	S							G	G	G	G	T	T			T	T				S	S				T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.
		696	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	S	A	E	G	K	V	V	R	F	K	E	S	S	V	R	A	M	G	C	N	T	T	G	V	R	G	I	R	L	G	E	G	D	K	V	V	S	L	I	V	P	R	G	D	G	A	I	L	T	A	T	Q	N	G	Y	G	K	R	T	A	V	A	E	Y	P	T	K	S	R	A	T	K	G	V	I	S	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	F	S	A	E	G	K	V	V	R	F	K	E	S	S	V	R	A	M	G	C	N	T	T	G	V	R	G	I	R	L	G	E	G	D	K	V	V	S	L	I	V	P	R	G	D	G	A	I	L	T	A	T	Q	N	G	Y	G	K	R	T	A	V	A	E	Y	P	T	K	S	R	A	T	K	G	V	I	S	I	K
Template Known Secondary structure					T	T	S							G	G	G	S		B			T	T											T	T											S	S								T	T	S							G	G	G	S					T	T	S					S	S
Template Predicted Secondary structure
Template SS confidence
		696	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.
		776	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	E	R	N	G	L	V	V	G	A	V	Q	V	D	D	C	D	Q	I	M	M	I	T	D	A	G	T	L	V	R	T	R	V	S	E	I	S	I	V	G	R	N	T	Q	G	V	I	L	I	R	T	A	E	D	E	N	V	V	G	L	Q	R	V	A	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	E	R	N	G	L	V	V	G	A	V	Q	V	D	D	C	D	Q	I	M	M	I	T	D	A	G	T	L	V	R	T	R	V	S	E	I	S	I	V	G	R	N	T	Q	G	V	I	L	I	R	T	A	E	D	E	N	V	V	G	L	Q	R	V	A	E
Template Known Secondary structure				T	T	T		S									T	T								S	S								G	G	G	S		B			S	S							S				T	T
Template Predicted Secondary structure
Template SS confidence
		776	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions