Return to main results Retrieve Phyre Job Id

Job DescriptionP0AES4
Confidence56.26%DateThu Jan 5 11:24:06 GMT 2012
Rank27Aligned Residues91
% Identity13%Templatec1c9lA_
PDB info PDB header:endocytosis/exocytosisChain: A: PDB Molecule:clathrin; PDBTitle: peptide-in-groove interactions link target proteins to the2 b-propeller of clathrin
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   712.......720.........730.........740.........750.........760.........770.........780.........790.
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  RAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDD
Query Conservation 
  

 
 




 
   
 

   
      

 


 
 



   


   





   
   
 
 

    
  
Alig confidence 















































.........






















Template Conservation       
 


  
     



 
 

 
 







 
     
  .........
 
 
   


 
 


      
Template Sequence  QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE. . . . . . . . . TGTCIYMNRISGETIFVTAPHEA
Template Known Secondary structure 









TT
SS

TTTTTTSTT.........T



SS
TT
Template Predicted Secondary structure 






















.........











Template SS confidence 















































































   241........250.........260.........270.........280........ .290.........300.........310.
 
   792.......800.........810.
Predicted Secondary structure 




Query SS confidence 



















Query Sequence  CDQIMMITDAGTLVRTRVSE
Query Conservation    

 
 
  
  

     
Alig confidence 



















Template Conservation 
 

  


 
 
  
 

 
Template Sequence  TAGIIGVNRKGQVLSVCVEE
Template Known Secondary structure  TTTTT
T
Template Predicted Secondary structure 






Template SS confidence 



















   312.......320.........330.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions