|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | R | L | E | F | S | I | Y | R | Y | N | P | D | V | D | D | A | P | R | M | Q | D | Y | T | L | E | A | D | E | G | R | D | M | M | L | L | D | A | L | I | Q | L | K | E | K | D | P | S | L | S | F | R | R | S | C | R | E | G | V | C | G | S | D | G | L | N | M | N | G | K | N | G | L | A | C | I | T | P | I | S |
Query Conservation |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |
|
|   |
|   |
|
|   |
|   |
|   |
|
|
|   |   |   |
|
|
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |   |
| . | . | . | . | . | . | . |
|
| . | . | . | . |   |   |   |   |
|   |
|   |
|   | . | . |   |
|
|
|   |   |
|
| . | . | . |   |   |   |   |
|   |
|   |
|   |   |
|   |   |
|   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |
|
|   |   |   |   |   |
Template Sequence |   |
M | R | I | S | A | T | I | . |
. |
. |
. |
. |
. |
. |
N | G | . |
. |
. |
. |
K | P | R | V | F | Y | V | E | P | R | . |
. |
M | H | L | A | D | A | L | R | . |
. |
. |
E | V | V | G | L | T | G | T | K | I | G | C | E | Q | G | V | C | G | S | C | T | I | L | I | D | G | A | P | M | R | S | C | L | T | L | A | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . | . | . | T | T | . | . | . | . |  |  |  |  |  |  |  |
| T | T | . | . | S | B |  |  |  |  |  |  | . | . | . |  | T | T |
|
| T | T | S |
|
| S |
| S | S | S | S | S |
| T | T |  |  |  |  | T | T |  |  |  |  | G | G | G | S | B | G | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  | . | . | . | . | . | . | . |
|
| . | . | . | . |  |  |  |  |  |  |
|
|
|
| . | . |
|
|  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | |
|
|
|
|
|
|
. | . | |
|
|
|
. | 20 | . | . | . | . | . | . | . | . | |
|
. | 30 | . | . | . | . | . | . | |
|
|
. | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | L | N | Q | P | G | K | K | I | V | I | R | P | L | P |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
Alig confidence |   |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
| . |   |   |
|   |
|
|
|
|
|
|
Template Sequence |   |
Q | A | E | G | . |
C | S | I | E | T | V | E | G | L | S |
Template Known Secondary structure |   |
G | G | T | T | . |
|  |  |  |
| G | G | G | T |
|
Template Predicted Secondary structure |   |
 |
|
|
| . |
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
74 | . | . | . | |
. | . | 80 | . | . | . | . | . | . | . |
  |