Job Description P07014 Confidence 99.85% Date Thu Jan 5 11:00:00 GMT 2012 Rank 13 Aligned Residues 199 % Identity 20% Template c3kwlA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a hypothetical protein from helicobacter pylori Resolution 1.94 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	L	E	F	S	I	Y	R	Y	N	P	D	V	D	D	A	P	R	M	Q	D	Y	T	L	E	A	D	E	G	R	D	M	M	L	L	D	A	L	I	Q	L	K	E	K	D	P	S	L	S	F	R	R	S	C	R	E	G	V	C	G	S	D	G	L	N	M	N	G	K	N	G	L	A	C	I	T	P	I	S
Query Conservation
Alig confidence																																.	.												.	.	.	.	.	.	.	.										.	.	.	.
Template Conservation																																.	.												.	.	.	.	.	.	.	.										.	.	.	.
Template Sequence		L	K	L	H	V	K	V	F	R	F	E	T	N	K	D	Y	N	P	A	Y	E	S	Y	F	L	E	Y	Q	E	D	.	.	Q	Y	L	L	D	L	L	K	Q	L	K	.	.	.	.	.	.	.	.	G	V	S	Y	S	E	N	I	A	.	.	.	.	L	K	I	N	Q	I	A	V	F	E	D	A	K	V	S	D
Template Known Secondary structure												B	T	T	S		S													T	T	.	.		B						T	T	S	T	.	.	.	.	.	.	.	.	T					S	S			.	.	.	.				T	T					S			B
Template Predicted Secondary structure																																.	.												.	.	.	.	.	.	.	.										.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.					.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	N	Q	P	G	K	K	I	V	I	R	P	L	P	G	L	P	V	I	R	D	L	V	V	D	M	G	Q	F	Y	A	Q	Y	E	K	I	K	P	Y	L	L	N	N	G	Q	N	P	P	A	R	E	H	L	Q	M	P	E	Q	R	E	K	L	D	G	L	Y	E	C	I	L	C	A	C	C	S	T	S	C	P
Query Conservation
Alig confidence																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	A	F	F	S	K	E	W	V	L	D	P	L	S	K	R	Y	A	L	K	D	L	X	I	D	E	K	A	V	L	K	N	Y	E	D	F	F	K	Q	V	P	Y	I	T	K	G	E	K	E	E	L	E	K	F	I	Q	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	F	I	N	P
Template Known Secondary structure								S							S		S	T	T				T	T									G	G	G						T		T	T	S							G	G	G	G	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	T
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.																		.	.	130	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	F	W	W	N	P	D	K	F	I	G	P	A	G	L	L	A	A	Y	R	F	L	I	D	S	R	D	T	E	T	D	S	R	L	D	G	L	S	D	A	F	S	V	F	R	C	H	S	I	M	N	C	V	S	V	C	P	K	G	L	N	P	T	R	A	I	G	H	I	K	S	M	L	L	Q
Query Conservation
Alig confidence				.	.	.																																																		.	.
Template Conservation				.	.	.																																																		.	.
Template Sequence		Q	T	.	.	.	N	P	K	Y	L	G	D	G	F	F	L	Y	V	K	W	L	X	K	R	Y	P	T	E	R	D	R	L	L	E	X	I	S	Q	P	E	S	G	V	X	N	F	L	S	V	A	H	Y	L	Y	.	.	K	N	D	D	N	I	D	H	E	I	Y	E	L	Q	E	I	L	T	N
Template Known Secondary structure				.	.	.		T	T																		G	G	G								T			T	T	T	S	G	G	G					G	G	G	B	T	.	.	T																		T
Template Predicted Secondary structure				.	.	.																																																		.	.
Template SS confidence
		133	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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