 |
Job Description | P07014 | Confidence | 97.54% | Date | Thu Jan 5 11:00:00 GMT 2012 |
Rank | 52 | Aligned Residues | 61 |
% Identity | 26% | Template | c3eubJ_ |
PDB info |
PDB header:oxidoreductase | Chain: J: PDB Molecule:xanthine dehydrogenase/oxidase; |
PDBTitle: crystal structure of desulfo-xanthine oxidase with xanthine
|
Resolution | 2.60 Å |
|
 |
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | A | D | E | G | R | D | M | M | L | L | D | A | L | I | Q | L | K | E | K | D | P | S | L | S | F | R | R | S | C | R | E | G | V | C | G | S | D | G | L | N | M | N | G | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
N | G | L | A | C | I | T | P | I | S | A | L | N | Q | P | G | K | K | I | V |
Query Conservation |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |
|
|   |
|   |
|
|   |
|   |
|   |
|
|
|   | . | . | . | . | . | . | . | . | . | . |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |   |
|
|   |   |
|
| . | . | . |   |   |
|
|
|
|
|   |
|   |
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |   |   |   |   | . | . |
|   |   |
|   |
Template Sequence |   |
V | E | K | N | A | D | P | E | T | T | L | L | A | Y | L | R | . |
. |
. |
R | K | L | G | L | R | G | T | K | L | G | C | G | E | G | G | C | G | A | C | T | V | M | L | S | K | Y | D | R | L | Q | D | K | I | I | H | F | S | A | N | A | C | L | A | P | I | C | T | L | H | . |
. |
H | V | A | V | T |
Template Known Secondary structure |   |
 |  | T | T |
|
| T | T |
| B |  |  |  |  |  |  | . | . | . |  | T | T |
|
| T | T | S |
|
| S |
| S | S | S | S | S |
| T | T |  |  |  |  |  |  |  |
| T | T | T | S | S |  |  |  |  |  |  |  | T | T | T |
| B | G | G | G |
| T | . | . | T |
|  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | |
|
|
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | |
|
. | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|