Job Description P07014 Confidence 100.00% Date Thu Jan 5 11:00:00 GMT 2012 Rank 2 Aligned Residues 232 % Identity 54% Template c2h89B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:succinate dehydrogenase ip subunit; PDBTitle: avian respiratory complex ii with malonate bound Resolution 2.40 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																																.
Query SS confidence															.																																.
Query Sequence		R	L	E	F	S	I	Y	R	Y	N	P	D	V	.	D	D	A	P	R	M	Q	D	Y	T	L	E	A	D	E	G	R	D	M	M	L	L	D	A	L	I	Q	L	K	E	K	.	D	P	S	L	S	F	R	R	S	C	R	E	G	V	C	G	S	D	G	L	N	M	N	G	K	N	G	L	A	C	I	T	P	I
Query Conservation															.																																.
Alig confidence															.																	.															.
Template Conservation																																.
Template Sequence		I	K	K	F	S	I	Y	R	W	D	P	D	K	P	G	D	K	P	R	M	Q	T	Y	E	V	D	L	N	K	C	.	G	P	M	V	L	D	A	L	I	K	I	K	N	E	L	D	S	T	L	T	F	R	R	S	C	R	E	G	I	C	G	S	C	A	M	N	I	A	G	G	N	T	L	A	C	T	K	K	I
Template Known Secondary structure												T	T	S	T	T												G	G	G	S	.		S	B												T		T	T								S	S	S	S	S		T	T					T	T					T	T	T	S	B
Template Predicted Secondary structure																																.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		S	A	L	N	Q	P	G	K	K	I	V	I	R	P	L	P	G	L	P	V	I	R	D	L	V	V	D	M	G	Q	F	Y	A	Q	Y	E	K	I	K	P	Y	L	L	N	N	G	Q	N	P	P	A	R	.	E	H	L	Q	M	P	E	Q	R	E	K	L	D	G	L	Y	E	C	I	L	C	A	C	C	S	T	S
Query Conservation																																																						.
Alig confidence						.	.																																															.
Template Conservation						.	.
Template Sequence		D	P	D	L	.	.	S	K	T	T	K	I	Y	P	L	P	H	M	Y	V	V	K	D	L	V	P	D	L	S	N	F	Y	A	Q	Y	K	S	I	E	P	Y	L	K	K	K	D	E	S	K	Q	G	K	E	Q	Y	L	Q	S	I	E	D	R	Q	K	L	D	G	L	Y	E	C	I	L	C	A	C	C	S	T	S
Template Known Secondary structure					T	.	.	T	S							S	S	S						T	T													T	T			S				S			T	T	T	T	S	S											T	T	T	T	T	T	T						T	T	G	G	G
Template Predicted Secondary structure						.	.
Template SS confidence
		90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	P	S	F	W	W	N	P	D	K	F	I	G	P	A	G	L	L	A	A	Y	R	F	L	I	D	S	R	D	T	E	T	D	S	R	L	D	G	L	S	D	A	F	S	V	F	R	C	H	S	I	M	N	C	V	S	V	C	P	K	G	L	N	P	T	R	A	I	G	H	I	K	S	M	L	L	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		C	P	S	Y	W	W	N	G	D	K	Y	L	G	P	A	V	L	M	Q	A	Y	R	W	M	I	D	S	R	D	D	Y	T	E	E	R	L	A	Q	L	Q	D	P	F	S	L	Y	R	C	H	T	I	M	N	C	T	R	T	C	P	K	G	L	N	P	G	K	A	I	A	E	I	K	K	M	M	A	T	Y
Template Known Secondary structure									T	T	T															S		T	T		S								T	T		S	T	T	T	T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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