Return to main results Retrieve Phyre Job Id

Job DescriptionP39332
Confidence3.43%DateThu Jan 5 11:59:23 GMT 2012
Rank92Aligned Residues50
% Identity18%Templated1w5da1
SCOP infobeta-lactamase/transpeptidase-like beta-lactamase/transpeptidase-like Dac-like
Resolution2.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30.........40..... ....50.........60.........70.......
Predicted Secondary structure 








.







Query SS confidence 

















.































Query Sequence  GDLLFVSGQVGSREDGTP. EPDFQQQVRLAFDNLHATLAAAGCTFDDIIDV
Query Conservation 
  
 



   
  
  .  
   
   

 

   
  

     

  
Alig confidence 

















.































Template Conservation         
                

           
   

 
 
    
Template Sequence  TNTITIEGSVPVDANKTKEWISVWEPAGYALDLFKQSLKKQGITVKGDIKT
Template Known Secondary structure  SSSS



SSTT
SS
Template Predicted Secondary structure 















Template SS confidence 


















































   220.........230.........240.........250.........260.........270
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions