Job Description P39332 Confidence 11.24% Date Thu Jan 5 11:59:23 GMT 2012 Rank 38 Aligned Residues 73 % Identity 14% Template c3tixB_ PDB info PDB header:gene regulation/protein binding Chain: B: PDB Molecule:chromo domain-containing protein 1; PDBTitle: crystal structure of the chp1-tas3 complex core Resolution 2.90 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.											.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.
Query Sequence		A	I	R	S	G	D	L	L	F	V	S	G	Q	V	G	S	R	E	D	G	T	P	E	P	D	F	Q	Q	Q	V	R	L	A	F	D	N	L	H	A	T	.	.	.	.	.	.	.	.	.	.	L	A	A	A	G	C	T	F	D	D	I	I	D	V	T	S	F	H	T	D	P	E	N	Q	F	E	D	I	M	T
Query Conservation																																										.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																																																																											.
Template Sequence		V	L	R	V	G	K	S	L	Y	Y	A	G	E	L	S	F	D	I	S	K	L	K	A	E	T	E	H	Q	Q	L	L	R	S	L	V	S	C	K	Q	V	D	V	L	R	F	V	T	S	Q	Y	L	E	V	F	G	T	C	L	T	K	V	L	S	G	S	L	C	I	R	S	D	V	D	.	M	T	H	F	K	N
Template Known Secondary structure						T	T	T	T															S		S	T	T																													T	T	S														S	S	.
Template Predicted Secondary structure																																																																											.
Template SS confidence
		523	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.		.	.	.	.	600	.
		94	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	N	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		602	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions