Return to main results Retrieve Phyre Job Id

Job DescriptionP39332
Confidence99.93%DateThu Jan 5 11:59:23 GMT 2012
Rank32Aligned Residues102
% Identity27%Templatec3lybC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:putative endoribonuclease; PDBTitle: structure of putative endoribonuclease(kp1_3112) from2 klebsiella pneumoniae
Resolution2.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40...... ...50.........60.........70.........
Predicted Secondary structure 









..........................






Query SS confidence 




















. . . . . . . . . . . . . . . . . . . . . . . . . .
































Query Sequence  RSGDLLFVSGQVGSREDGTPE. . . . . . . . . . . . . . . . . . . . . . . . . . PDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTS
Query Conservation    
  
 



   
  
   .......................... 
   
   

 

   
  

     

    
Alig confidence 




















..........................
































Template Conservation 


  

 

     
                     

        
    
    
 

   
  

    


   
Template Sequence  RAGDFIFLSGIIPVNPTGTIVNGFQDVPEPVRELLGATGEFSTDAKQGPILAQSWYVLESIRRTVASAGGQXSDVIKLVQ
Template Known Secondary structure  TT

B
SB




B

SGGGS
T

S
TTT

GGG
Template Predicted Secondary structure 






































Template SS confidence 















































































   1920.........30.........40.........50.........60.........70.........80.........90........
 
   80.........90.........100.........110.... . ....120.........
Predicted Secondary structure 










.
..



Query SS confidence 


































.
. .













Query Sequence  FHTDPENQFEDIMTVKNEIFSAPPYPNWTAVGVTW. L. . AGFDFEIKVIARIP
Query Conservation 
                        

 
 
 
  .
..
  




 

  
Alig confidence 






.











.













.
..













Template Conservation 

 
   .           
.    

 
 
 
   
  
  







  
Template Sequence  YFRNLDH. FPYYSRVRKLFY. PDQPPVSTVVQVSEXLPDATVLIEVEATVWLP
Template Known Secondary structure  S
GGG.
.SSS


S

SS
TT



Template Predicted Secondary structure 

..











Template SS confidence 




















































   100...... ...110........ .120.........130.........140.........150
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions