 |
Job Description | P39332 | Confidence | 5.88% | Date | Thu Jan 5 11:59:23 GMT 2012 |
Rank | 55 | Aligned Residues | 36 |
% Identity | 17% | Template | c2dvzA_ |
PDB info |
PDB header:transport protein | Chain: A: PDB Molecule:putative exported protein; |
PDBTitle: structure of a periplasmic transporter
|
Resolution | 2.30 Å |
|
  |   |
38 | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | R | E | D | G | T | P | E | P | D | F | Q | Q | Q | V | R | L | A | F | D | N | L | H | A | T | L | A | A | A | G | C | T | F | D | D |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |
Template Sequence |   |
G | S | A | P | S | G | N | T | P | E | E | F | A | K | E | I | K | E | Q | Y | D | W | A | Q | D | V | V | K | K | Q | N | I | K | L | D | E |
Template Known Secondary structure |   |
T |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|