Return to main results Retrieve Phyre Job Id

Job DescriptionP52131
Confidence97.85%DateThu Jan 5 12:05:36 GMT 2012
Rank294Aligned Residues123
% Identity18%Templated1vmaa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nitrogenase iron protein-like
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.......
Predicted Secondary structure 

























...................................
Query SS confidence 












































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  THYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation        


 
  










 
           

      ...................................
Alig confidence 












































...................................
Template Conservation     
 
  
 
 







   

         
     
                                       
Template Sequence  PEPPFVIMVVGVNGTGKTTSCGKLAKMFVDEGKSVVLAAADTFRAAAIEQLKIWGERVGATVISHSEGADPAAVAFDAVA
Template Known Secondary structure  SSS


TTSSTT


TT
T


STT

Template Predicted Secondary structure 

































Template SS confidence 















































































   8990.........100.........110.........120.........130.........140.........150.........160........
 
   78.80.........90.........100.........110.. .......120.........130.........140.........150..
Predicted Secondary structure 










.....













Query SS confidence 


































. . . . .







































Query Sequence  RLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQL. . . . . PRLDLILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVI
Query Conservation          
 
 
 

                   .....     
  
                          

 
 
Alig confidence 


































.....













....





















Template Conservation         
 
  
  
                                 

   ....                   

 
Template Sequence  HALARNKDVVIIDTAGRLHTKKNLMEELRKVHRVVKKKIPDAPHETLLVIDATT. . . . GQNGLVQAKIFKEAVNVTGIIL
Template Known Secondary structure  TT
S



S
GGGT
TT

SGGG....S


Template Predicted Secondary structure 



















....




Template SS confidence 















































































   169170.........180.........190.........200.........210.........220.. .......230.........240....
 
   153......
Predicted Secondary structure 





Query SS confidence 






Query Sequence  SQSDKAE
Query Conservation 

 
   
Alig confidence 






Template Conservation 
  

  
Template Sequence  TKLDGTA
Template Known Secondary structure 
GGG
S
Template Predicted Secondary structure 


Template SS confidence 






   245....250.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions