Return to main results Retrieve Phyre Job Id

Job DescriptionP52131
Confidence99.30%DateThu Jan 5 12:05:36 GMT 2012
Rank131Aligned Residues170
% Identity11%Templated1kmqa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases G proteins
Resolution1.55

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  VIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLPRLDL
Query Conservation   


 
  










 
           

              
 
 
 

                        
Alig confidence 























..





































.....










Template Conservation 





   






 
     
..      
                               .....           
Template Sequence  KLVIVGDGACGKTCLLIVNSKDQF. . PEVYVPTVFENYVADIEVDGKQVELALWDTAGLEDYDR. . . . . LRPLSYPDTDV
Template Known Secondary structure  STTSSS

..
SS



STT

SGGGTT.....TGGGG
TT
S
Template Predicted Secondary structure 








..



























.....









Template SS confidence 















































































   7..10.........20.........30 .........40.........50.........60........ .70.........
 
   118.120.........130.........140. ........150.........160.........170.........180.........190.....
Predicted Secondary structure 





..


















Query SS confidence 























. .





















































Query Sequence  ILWLIKADDRALATDEHFYRQVIG. . EAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAV
Query Conservation 
  
                    ..      

 
 

 
                                      
Alig confidence 























..





















































Template Conservation                                        
 
                                     
 
Template Sequence  ILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMEC
Template Known Secondary structure  TT
TSTTS

GGGTT
TT




TT
S
Template Predicted Secondary structure 





































Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140.........150.........
 
   196...200.........210....
Predicted Secondary structure 






Query SS confidence 


















Query Sequence  SVRLQWGLRVMAERMIKCL
Query Conservation 

    

  
   
   
Alig confidence 


















Template Conservation 




  
   
  
    
Template Sequence  SAKTKDGVREVFEMATRAA
Template Known Secondary structure 
TTT
TT
Template Predicted Secondary structure 





Template SS confidence 


















   160.........170........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions