Return to main results Retrieve Phyre Job Id

Job DescriptionP52131
Confidence99.35%DateThu Jan 5 12:05:36 GMT 2012
Rank123Aligned Residues159
% Identity13%Templatec3t1tC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:gliding protein mgla; PDBTitle: mgla bound to gdp in p1 tetrameric arrangement
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80. ........90.........100.........110.
Predicted Secondary structure 




















......










Query SS confidence 











































. . . . . .





























Query Sequence  VIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQI. . . . . . GEHFMTIVDLPGVGESGVRDTEYAALYREQ
Query Conservation   


 
  










 
           

          ......    
 
 
 

                  
Alig confidence 











































......











.......










Template Conservation 

 
 
    





  
                                     
 
  
.......           
Template Sequence  KIVYYGPGLSGKTTNLKWIYSKVPEGRKGEXVSLATEDERTLFFDFLPLDIKTRFHLYTVPG. . . . . . . QVFYNASRKLI
Template Known Secondary structure 
STTSSS
GGGB



SS


S




S.......

S
S
Template Predicted Secondary structure 





















.......




Template SS confidence 















































































   14.....20.........30.........40.........50.........60.........70..... ....80......
 
   112.......120.........130.........140 .........150.........160.........170.........180....
Predicted Secondary structure 









.......













Query SS confidence 




























. . . . . . .











































Query Sequence  LPRLDLILWLIKADDRALATDEHFYRQVI. . . . . . . GEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHE
Query Conservation        
  
                   .......       

 
 

 
                            
Alig confidence 




























.......
















..............












Template Conservation           
 
                                       
 ..............             
Template Sequence  LRGVDGIVFVADSAPNRLRANAESXRNXRENLAEYGLTLDDVPIVIQVNKRDL. . . . . . . . . . . . . . PDALPVEXVRAVV
Template Known Secondary structure  TTT
S

GGGTTT

TTSS

TTS..............TT


Template Predicted Secondary structure 




















..............
Template SS confidence 















































































   93......100.........110.........120.........130.........140..... ....150........
 
   185....190.........200.........210.......
Predicted Secondary structure 












Query SS confidence 
































Query Sequence  LFQPVHPVCAVSVRLQWGLRVMAERMIKCLPRE
Query Conservation            


    

  
   
   
   
Alig confidence 
































Template Conservation             

 

 

 
    
   

 
Template Sequence  DPEGKFPVLEAVATEGKGVFETLKEVSRLVLAR
Template Known Secondary structure 
TT

S

BGGGTBT
Template Predicted Secondary structure 









Template SS confidence 
































   159160.........170.........180.........190.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions