Job Description P52131 Confidence 96.61% Date Thu Jan 5 12:05:36 GMT 2012
Rank 431 Aligned Residues 108
% Identity 15% Template c3pfiB_
PDB info
PDB header: hydrolaseChain: B: PDB Molecule: holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
Resolution 2.69 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
23 . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E R I L Q Q I N Q L T H Y E P V I G I M G K T G A G K S S L C N A L F A G E V S P V S D V A A C T R D P L R F R L Q I G E H F M T I V D L P G V G E S G V R D T
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Template Conservation  
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Template Sequence  
N V F I A A A K K R N E C L D H I L F S G P A G L G K T T L A N I I S Y E .
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X S A N I K T T A A P X I E K S G D L A A
Template Known Secondary structure  
T T S S T T S S . . . . . . . . . . . . . . . . . . . . . . T T G G G S S
Template Predicted Secondary structure  
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Template SS confidence  
   
39 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . .
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103 . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . . . . . .
Predicted Secondary structure  
Query SS confidence  
Query Sequence  
E Y A A L Y R E Q L P R L D L I L W L I K A D D R A L A T D E H F Y R Q V I G E A Y R H K M L F V I S Q S D K A E
Query Conservation  
                                                                                                 
Alig confidence  
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Template Sequence  
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I L F I D E I H R L S P A I E E V L Y P A X E D Y P K F T L I G A T T R A G X L S
Template Known Secondary structure  
T T T . . . . . . . S G G G T S G G G S
Template Predicted Secondary structure  
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Template SS confidence  
   
97 . . 100 . . . . .
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]