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Job DescriptionP52131
Confidence96.61%DateThu Jan 5 12:05:36 GMT 2012
Rank431Aligned Residues108
% Identity15%Templatec3pfiB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:holliday junction atp-dependent dna helicase ruvb; PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
Resolution2.69 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.........90.........100..
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Query Sequence  ERILQQINQLTHYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDT
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Template Sequence  NVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYE. . . . . . . . . . . . . . . . . . . . . . XSANIKTTAAPXIEKSGDLAA
Template Known Secondary structure  TT




SSTTSS......................TT

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   3940.........50.........60.........70..... ....80.........90......
 
   103......110.........120.........130.........140.........150.........
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Query Sequence  EYAALYREQLPRLDLILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAE
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Template Sequence  ILTNLSEGD. . . . . . . ILFIDEIHRLSPAIEEVLYPAXEDYPKFTLIGATTRAGXLS
Template Known Secondary structure  T

TT
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   97..100..... ....110.........120.........130.........140......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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