Job Description P52131 Confidence 99.82% Date Thu Jan 5 12:05:36 GMT 2012 Rank 17 Aligned Residues 237 % Identity 13% Template c3md0A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:arginine/ornithine transport system atpase; PDBTitle: crystal structure of arginine/ornithine transport system2 atpase from mycobacterium tuberculosis bound to gdp (a ras-3 like gtpase superfamily protein) Resolution 2.45 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	W	V	S	E	R	I	L	Q	Q	I	N	Q	L	T	H	Y	E	P	V	I	G	I	M	G	K	T	G	A	G	K	S	S	L	C	N	A	L	F	A	G	E	V	S	P	V	S	D	V	A	A	C	T	R	D	P	L	R	F	R	L	Q	I	G	E	H	F	M	T	I	V	D	L	P	G	V	G	E	S
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		H	R	E	Q	A	Q	Q	L	L	L	R	L	L	P	D	S	G	N	A	H	R	V	G	I	T	G	V	P	G	V	G	K	S	T	A	I	E	A	L	G	M	H	L	I	.	E	R	G	H	R	V	A	V	L	A	V	R	M	A	R	L	A	V	H	P	N	A	Y	I	R	P	S	T	L	G	G	V	T	R	A
Template Known Secondary structure														G	G	G				S									T	T	S	S														.	T	T	T															T	S	T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.														.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	R	D	T	E	Y	A	A	L	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	R	E	Q	L	P	R	L	D	L	I	L	W	L	I	K	A	D	D	R	A	L	A	T	D	E	H	F	Y	R	Q	V	I	G	E	A	Y	R	H	K	M	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.																						.	.	.	.
Template Conservation																																																	.	.	.	.	.	.																						.	.	.	.
Template Sequence		T	R	E	T	V	V	L	L	E	A	A	G	F	D	V	I	L	I	E	T	G	Q	S	E	V	A	V	A	N	M	V	D	T	F	V	L	L	T	L	A	R	T	G	D	Q	L	Q	.	.	.	.	.	.	G	I	K	K	G	V	L	E	L	A	D	I	V	V	V	N	K	A	D	G	E	.	.	.	.	H	H
Template Known Secondary structure												T	T																	T	T		S								S		T	T	T	T	T	T	.	.	.	.	.	.	T			T	T	G	G	G	G		S									G	G	.	.	.	.	G
Template Predicted Secondary structure																																																	.	.	.	.	.	.																						.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	S	T	E	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A	V	S	V	R	L	Q	W	G	L	R	V	M	A	E	R	M	I	K	C	L	P	R	E	A	S	S	P	V	V	A	L	L	Q	H	P	F	R	T	T	V	A	R	E	Q	A	R	D	D	F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	A	R	L	A	A	R	E	L	S	A	A	I	R	L	I	Y	P	R	E	A	L	W	R	P	P	V	L	T	M	S	A	V	E	G	R	G	L	A	E	L	W	D	T	V	E	R	H	R	Q	V	L	T	G	A	G	E	F	D	A	R	R	R	D	Q	Q	V	D	W	T	W	Q	L	V	R	D	A	V	L
Template Known Secondary structure																			S	T	T		S	S									B	T	T	T	T	B	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	T	V	G	A	I	L	D	T	V	S	T	F	P	L	I	P	A	P	V	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	R	V	W	S	N	P	T	V	R	K	V	R	S	E	L	E	R	R	V	R
Template Known Secondary structure						T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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