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Job DescriptionP52131
Confidence98.90%DateThu Jan 5 12:05:36 GMT 2012
Rank239Aligned Residues134
% Identity15%Templatec3mcaA_
PDB info PDB header:translation regulation/hydrolaseChain: A: PDB Molecule:elongation factor 1 alpha-like protein; PDBTitle: structure of the dom34-hbs1 complex and implications for its role in2 no-go decay
Resolution2.74 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  HYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLP
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Template Sequence  KPVVHLVVTGHVDSGKSTMLGRIMFELGEI. . . . . . . . . . . . . . . . . . . . . . . . IGDAPG. . . . . . . HRDFISGMIAAVL
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   175....180.........190.........200.... .....210 .........220...
 
   114.....120.........130.........140....... ..150.........160.........170.........180.........190..
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Query Sequence  RLDLILWLIKADDRALATDEHFYRQVIGEAYRHK. MLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPV
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Template Sequence  VVDSSQNNFERGFLENGQTREHAYLLR. . ALGISEIVVSVNKLDLMS. . . WSEDRFQEIKNIVSDFLIKMVGFKTSNVHF
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   285....290.........300.........310. ........320......... 330.........340.........350.........
 
   193......200...
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Query Sequence  CAVSVRLQWGL
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Template Sequence  VPISAISGTNL
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   360.........370
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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