Job Description P52131 Confidence 99.55% Date Thu Jan 5 12:05:36 GMT 2012 Rank 83 Aligned Residues 214 % Identity 23% Template c3geiB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:trna modification gtpase mnme; PDBTitle: crystal structure of mnme from chlorobium tepidum in complex2 with gcp Resolution 3.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	V	L	Q	P	L	Q	N	S	L	S	G	L	P	L	W	V	S	E	R	I	L	Q	Q	I	N	Q	L	T	H	Y	E	P	V	I	G	I	M	G	K	T	G	A	G	K	S	S	L	C	N	A	L	F	A	G	E	V	S	P	V	S	D	V	A	A	C	T	R	D	P	L	R	F	R	L	Q	I	G	E	H
Query Conservation
Alig confidence																					.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	Q	I	E	T	L	R	S	E	V	N	R	L	I	D	S	Y	Q	H	.	.	.	.	.	.	G	R	I	V	S	E	G	V	S	T	V	I	A	G	K	P	N	A	G	K	S	T	L	L	N	T	L	L	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	F	I	H	D	K	T
Template Known Secondary structure																					.	.	.	.	.	.																T	T	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure																					.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.							.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.																			.	.	.	.	.	.	260
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	T	I	V	D	L	P	G	V	G	E	S	G	V	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L	D	L	I	L	W	L	I	K	A	D	D	R	A	L	A	T	D	E	H	F	Y	R	Q	V	I	G	E	A	Y	R	H	K	M	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.
Template Sequence		M	F	R	L	T	D	M	K	M	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	D	L	I	L	Y	L	L	D	L	G	T	E	R	L	D	D	E	L	T	E	I	R	E	L	K	A	A	H	P	A	A	K	F	L	T	V	A	N	K	L	D	R	A	A	N	A	D	.	.
Template Known Secondary structure											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S		S								T	T	T	S	S	S			T	T											T	T	S									T	T	T		S	S			.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.																				.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	L	S	T	E	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A	V	S	V	R	L	Q	W	G	L	R	V	M	A	E	R	M	I	K	C	L	P	R	E	A	S	S	P	V	V	A	L	L	Q	H	P	F	R	T	T	V	A	R	E	Q	A	R	D	D	F	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	I	R	A	I	A	D	G	T	G	T	E	V	I	G	I	S	A	L	N	G	D	G	I	D	T	L	K	Q	H	M	G	D	L	V	K	S	.	.	.	.	.	.	.	.	V	L	V	T	S	L	R	H	Y	E	A	L	R	N	A	S	D	A	L	Q
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T	S						B	T	T	T	T	B	S									T	T	T	T			.	.	.	.	.	.	.	.					S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																							.	.	.	.	.	.	.	.
Template SS confidence
																358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.									.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.						.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.
Query Sequence		E	T	V	G	A	I	L	D	T	V	S	T	F	P	L	I	P	A	P	V	R	T	I	I	Q	A	V	R	S	S	V	.	.	.	.	.	V	S	V	A	R	A	V	W	D	F	F
Query Conservation																																	.	.	.	.	.
Alig confidence								.																									.	.	.	.	.
Template Conservation								.
Template Sequence		N	A	L	E	L	I	.	A	H	E	S	E	T	E	L	I	A	F	E	L	R	A	A	L	D	Y	V	G	Q	I	T	G	K	V	V	N	E	E	V	L	N	T	I	F	D	K	F
Template Known Secondary structure								.		T	T																					T	T	S	S			S	S							T	S	S
Template Predicted Secondary structure								.
Template SS confidence
		424	.	.	.	.	.		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions