Job Description P52131 Confidence 99.06% Date Thu Jan 5 12:05:36 GMT 2012 Rank 197 Aligned Residues 153 % Identity 13% Template c3dpuA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:rab family protein; PDBTitle: roccor domain tandem of rab family protein (roco) Resolution 2.90 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	L	S	G	L	P	L	W	V	S	E	R	I	L	Q	Q	I	N	Q	L	T	H	Y	E	P	V	I	G	I	M	G	K	T	G	A	G	K	S	S	L	C	N	A	L	F	A	G	E	V	S	P	V	S	D	V	A	A	C	T	R	D	P	L	R	F	R	L	Q	I	G	E	H	F	M	T	I	V	D	L
Query Conservation
Alig confidence																																																																			.	.
Template Conservation																																																																			.	.
Template Sequence		E	A	V	R	Q	Y	F	Q	S	I	E	E	A	R	S	K	G	E	A	L	V	H	L	Q	E	I	K	V	H	L	I	G	D	G	M	A	G	K	T	S	L	L	K	Q	L	I	G	G	L	N	V	V	T	K	Q	A	P	N	I	K	G	L	E	N	D	.	.	D	E	L	K	E	C	L	F	H	F	W	D	F
Template Known Secondary structure																	T	T				B											S	S	S		S	S																			G	G	G	S	G	G	G	T	T		.	.	S	T	T	T	T
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		428	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.			.	.	.	.	.	.	.	500	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	V	G	E	S	G	V	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L	D	L	I	L	W	L	I	K	A	D	D	R	A	L	A	T	D	E	H	F	Y	R	Q	V	I	G	E	A	Y	R	H	K	M	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	N	I	L	S	T	E	Q
Query Conservation
Alig confidence																	.	.	.	.	.	.	.																					.	.
Template Conservation																	.	.	.	.	.	.	.																					.	.
Template Sequence		G	G	Q	E	I	M	H	A	S	H	Q	F	F	M	T	.	.	.	.	.	.	.	R	S	S	V	Y	M	L	L	L	D	S	R	T	D	S	N	K	H	Y	W	.	.	L	R	H	I	E	K	Y	G	G	K	S	P	V	I	V	V	M	N	K	I	D	E	N	P	S	Y	N	I	E	Q	K	K	I	N	E	R
Template Known Secondary structure			S			T	T	T	T	T							.	.	.	.	.	.	.	S	S									G	G	G	G	G	G					.	.								S	S	S										T	T	T		T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.																					.	.
Template SS confidence
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.								.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.			.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.
		172	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	P	A	I
Template Known Secondary structure			G	G	G
Template Predicted Secondary structure
Template SS confidence
		588	.	590	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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