Return to main results Retrieve Phyre Job Id

Job DescriptionP52131
Confidence96.60%DateThu Jan 5 12:05:36 GMT 2012
Rank434Aligned Residues30
% Identity20%Templatec3b5xB_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:lipid a export atp-binding/permease protein msba; PDBTitle: crystal structure of msba from vibrio cholerae
Resolution5.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.......
Predicted Secondary structure 















Query SS confidence 





























Query Sequence  VIGIMGKTGAGKSSLCNALFAGEVSPVSDV
Query Conservation   


 
  










 
         
Alig confidence 





























Template Conservation     
 
 







   
 
      
 
Template Sequence  TVALVGRSGSGKSTIANLFTRFYDVDSGSI
Template Known Secondary structure 

TTTTTTS

SS



S
Template Predicted Secondary structure 



















Template SS confidence 





























   371........380.........390.........400
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions