Job Description P52131 Confidence 99.09% Date Thu Jan 5 12:05:36 GMT 2012 Rank 186 Aligned Residues 148 % Identity 17% Template c2zejA_ PDB info PDB header:transferase Chain: A: PDB Molecule:leucine-rich repeat kinase 2; PDBTitle: structure of the roc domain from the parkinson's disease-associated2 leucine-rich repeat kinase 2 reveals a dimeric gtpase Resolution 2.00 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	I	G	I	M	G	K	T	G	A	G	K	S	S	L	C	N	A	L	F	A	G	E	V	S	P	V	S	D	V	A	A	C	T	R	D	P	L	R	F	R	L	Q	I	G	E	H	F	M	T	I	V	D	L	P	G	V	G	E	S	G	V	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.														.	.											.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.														.	.											.	.	.	.	.	.	.
Template Sequence		X	K	L	X	I	V	G	N	T	G	S	G	K	T	T	L	L	Q	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	X	K	T	V	G	I	D	V	K	D	W	P	I	.	.	L	V	L	N	V	W	D	F	A	G	.	.	.	.	.	.	.	R	E	E	F	Y	S	T	H	P	H	F	X	T	Q	R	A
Template Known Secondary structure								S		T	T	S	S									.	.	.	.	.	.	.	.	.	.	.	.	T				S									.	.										S	.	.	.	.	.	.	.						T	T	S							S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.														.	.											.	.	.	.	.	.	.
Template SS confidence
		1335	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.													.	.	.	.	.	1360	.	.	.	.	.	.	.			.	.	1370	.	.	.	.	.	.	.								.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		L	I	L	W	L	I	K	A	D	D	R	A	L	A	T	D	.	.	E	H	F	Y	R	Q	V	I	G	E	A	Y	R	H	K	M	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	N	I	L	S	T	E	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A
Query Conservation																		.	.
Alig confidence																		.	.																										.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	L	A	V	Y	D	L	S	K	G	Q	A	E	V	D	A	X	K	P	W	L	F	N	I	K	A	R	A	S	S	S	P	V	I	L	V	G	T	H	L	D	V	.	.	.	.	.	.	.	.	.	S	D	E	K	Q	R	K	A	C	X	S	K	I	T	K	E	L	L	N	K	R	G	F	P	A	I	R	D
Template Known Secondary structure									G	G	G							T													T	T										G	G	G	.	.	.	.	.	.	.	.	.																	T	T	T		T	T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		1414	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.										.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	V	R	L	Q	W	G	L	R	V	M	A	E	R	M	I	K	C	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	H	F	V	N	A	T	E	E	S	D	A	L	A	K	L	R	K	T	I
Template Known Secondary structure							T	T	S
Template Predicted Secondary structure
Template SS confidence
		1485	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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