Return to main results Retrieve Phyre Job Id

Job DescriptionP52131
Confidence99.49%DateThu Jan 5 12:05:36 GMT 2012
Rank101Aligned Residues169
% Identity11%Templatec2rexD_
PDB info PDB header:signaling protein/lipoproteinChain: D: PDB Molecule:rho-related gtp-binding protein rho6; PDBTitle: crystal structure of the effector domain of plxnb1 bound with rnd12 gtpase
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  VIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLPRLDL
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Template Sequence  KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGS. . . . . . . PYYDNVRPLCYSDSDA
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STTSSS



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S
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S.......GGGTTTGGGGGTT
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   15....20.........30.........40.........50.........60.........70. ........80.......
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  ILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSV
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Template Sequence  VLLCFDISRPETVALKKWRTEILDYCPSTRVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSA
Template Known Secondary structure  TT
TTT


TTS
GGGGG
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TT
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T
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   88.90.........100.........110.........120.........130.........140.........150.........160.......
 
   198.200. ........210...
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Query Sequence  RLQW. GLRVMAERMIKC
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Template Sequence  FTSEKSIHSIFRTASML
Template Known Secondary structure  TT
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   170.........180......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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