Return to main results Retrieve Phyre Job Id

Job DescriptionP52131
Confidence98.18%DateThu Jan 5 12:05:36 GMT 2012
Rank281Aligned Residues141
% Identity13%Templatec2qy9A_
PDB info PDB header:protein transportChain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30... ......40.........50....... ..60.....
Predicted Secondary structure 
.......









......







................
Query SS confidence 


















. . . . . . .























. . . . . .







. . . . . . . . . . . . . . . .
Query Sequence  SGLPLWVSERILQQINQLT. . . . . . . HYEPVIGIMGKTGAGKSSLCNALF. . . . . . AGEVSPVS. . . . . . . . . . . . . . . .
Query Conservation    
           
  
 .......     


 
  










 ......
       ................
Alig confidence 


















.......























......







................
Template Conservation        
   
   
               

  

  
 




 



      
  
 

  
  
  
  

   
Template Sequence  EALYGLLKEEMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAAGDTFRAAAVEQLQVWG
Template Known Secondary structure  GGTT






S
TT

TTS
TTT




TT
Template Predicted Secondary structure 




























Template SS confidence 















































































   265....270.........280.........290.........300.........310.........320.........330.........340....
 
   66...70.........80 .........90.........100.........110.... .....120.......
Predicted Secondary structure 






.............












.....





Query SS confidence 














. . . . . . . . . . . . .

































. . . . .












Query Sequence  DVAACTRDPLRFRLQ. . . . . . . . . . . . . IGEHFMTIVDLPGVGESGVRDTEYAALYREQLPR. . . . . LDLILWLIKADDR
Query Conservation      

         .............     
 
 
 

                     .....   
  
      
Alig confidence 














.............

































.....











.
Template Conservation      
                 
         
 







      
  

  
           
    


 
  .
Template Sequence  QRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDAST.
Template Known Secondary structure  TT



STT

TT
S




GGGTTT
TT

SGGG.
Template Predicted Secondary structure 






























.
Template SS confidence 















































































   345....350.........360.........370.........380.........390.........400.........410.........420...
 
   128.130.........140.........150.........
Predicted Secondary structure 











Query SS confidence 































Query Sequence  ALATDEHFYRQVIGEAYRHKMLFVISQSDKAE
Query Conservation                      

 
 

 
   
Alig confidence  ...




























Template Conservation  ...                    







 
Template Sequence  . . . GQNAVSQAKLFHEAVGLTGITLTKLDGTA
Template Known Secondary structure  ...TS




TT
T
Template Predicted Secondary structure  ...











Template SS confidence 































   424.....430.........440.........450..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions