Job Description P52131 Confidence 99.86% Date Thu Jan 5 12:05:36 GMT 2012 Rank 11 Aligned Residues 270 % Identity 21% Template c2j69D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:bacterial dynamin-like protein; PDBTitle: bacterial dynamin-like protein bdlp Resolution 3.0 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.																								.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	N	F	E	V	L	Q	P	L	Q	N	S	L	S	G	L	P	L	W	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	I	L	Q	Q	I	N	Q	L	T	H	Y	E	P	V	I	G	I	M	G	K	T	G	A	G	K	S	S	L	C	N	A	L	F
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	D	L	E	R	V	A	Q	V	R	S	E	M	S	V	C	L	N	K	L	A	E	T	I	N	K	A	E	L	A	G	D	S	S	S	G	K	L	S	L	E	R	D	I	E	D	I	T	I	A	S	K	N	L	Q	Q	G	V	F	R	L	L	V	L	G	D	M	K	R	G	K	S	T	F	L	N	A	L	I
Template Known Secondary structure																																T	T	T	T	T	T				S																												T	T	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	E	V	S	P	V	S	D	V	A	A	C	T	R	D	P	L	R	F	R	L	Q	I	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.
Template Sequence		G	E	N	L	L	P	S	D	V	N	P	.	C	T	A	V	L	T	V	L	R	Y	G	P	E	K	K	V	T	I	H	F	N	D	G	K	S	P	Q	Q	L	D	F	Q	N	F	K	Y	K	Y	T	I	D	P	A	E	A	K	K	L	E	Q	E	K	K	Q	A	F	P	D	V	D	Y	A	V	V	E	Y	P	L
Template Known Secondary structure		T	S	S		S					S	T	.	T	T										S	S								S	S	S															S												T	S	S			S		T	T
Template Predicted Secondary structure													.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
						84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	H	F	M	T	I	V	D	L	P	G	V	G	E	S	G	V	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L	D	L	I	L	W	L	I	K	A	D	D	R	A	L	A	T	D	E	H	F	Y	R	Q	V	I	G	E	A	Y	R	H	K	M	L	F	V	I	S	Q	S	D	K	A	E
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.														.	.	.	.																																										.
Template Conservation																			.	.	.	.																																										.
Template Sequence		T	L	L	Q	K	G	I	E	I	V	D	S	P	G	L	N	D	.	.	.	.	T	E	A	R	N	E	L	S	L	G	Y	V	N	N	C	H	A	I	L	F	V	M	R	A	S	Q	P	C	T	L	G	E	R	R	Y	L	E	N	Y	I	K	.	G	R	G	L	T	V	F	F	L	V	N	A	W	D	Q	V	R
Template Known Secondary structure						T	T												.	.	.	.			T						T					S	S	S								T	T	S		S												T	T	.	T	S											G	G	G	G	G
Template Predicted Secondary structure																			.	.	.	.																																										.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.											.	190	.	.	.	.	.	.	.	.	.															200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	T	S	G	G	N	I	L	S	T	E	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	.	.	.	.	.	.	.	.	.	.	V	H	P	V	C	A	V	S	V	R	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	W	G	L	R	V	M	A	E	R	M	I	K	C	L	P
Query Conservation																															.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	S	L	I	D	P	D	D	V	E	E	L	Q	A	S	E	N	R	L	R	Q	V	F	N	A	N	L	A	E	Y	C	T	V	E	G	Q	N	I	Y	D	E	R	V	F	E	L	S	S	I	Q	A	L	R	R	R	L	K	N	P	Q	A	D	L	D	G	T	G	F	P	K	F	M	D	S	L	N	T	F	L	T
Template Known Secondary structure		G	G		S	S	T	T																					G	G	G	S	B	S	S	S		B		G	G	G	T																	T	T				T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	A	S	S	P	V	V	A	L	L	Q	H	P	F	R	T	T	V	A	R	E	Q	A	R	D	D	F	G	E	T	V	G	A	I	L	D	T	V	S	T	F	P	L	I	P	A	P	V	R	T	I	I	Q	A	V	R	S	S	V	V	S	V	A	R	A	V	W	D	F
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.
Template Sequence		R	E	R	A	I	A	.	.	.	.	.	.	.	.	.	E	L	R	Q	V	R	T	L	A	R	L	A	C	N	H	T	R	E	A	V	A	R	R	I	P	L	L	E	Q	D	V	N	E	L	K	K	R	I	D	S	V	E	P	E	F	N	K	L	T	G	I	R	D	E	F
Template Known Secondary structure			T					.	.	.	.	.	.	.	.	.																											S	S	S		S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.
Template SS confidence
		325	.	.	.	.	330										.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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