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Job DescriptionP52131
Confidence98.85%DateThu Jan 5 12:05:36 GMT 2012
Rank246Aligned Residues161
% Identity15%Templatec2il1A_
PDB info PDB header:protein transportChain: A: PDB Molecule:rab12; PDBTitle: crystal structure of a predicted human gtpase in complex with gdp
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   33......40.........50.........60.........70.........80.........90.........100.........110..
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Query Sequence  THYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTRDPLRFRLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQL
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Template Sequence  ADFKLQVIIIGSRGVGKTSLMERFTDSTV. . . . . . . GVDFKIKTVELRGKKIRLQIWDTAGQER. . . . . FNSITSAYYRS
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SGG.....G
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   135....140.........150.........160... ......170.........180.........190. ........200..
 
   113......120.........130.........140.........150.........160.........170.........180.........190..
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Query Sequence  PRLDLILWLIKADDRALATDEHFYRQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPV
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Template Sequence  AKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDCETDRE. . . . . . . . . . . . ITRQQGEKFAQQITGMRF
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   211........220.........230.........240.........250.........260 .........270........
 
   193......200.........210.......
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Query Sequence  CAVSVRLQWGLRVMAERMIKCLPRE
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Template Sequence  CEASAKDNFNVDEIFLKLVDDILKK
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BTTTTBST
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   279280.........290.........300...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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