Job Description P52131 Confidence 98.87% Date Thu Jan 5 12:05:36 GMT 2012 Rank 243 Aligned Residues 146 % Identity 14% Template c2efhD_ PDB info PDB header:transport protein Chain: D: PDB Molecule:small gtp-binding protein-like; PDBTitle: ara7-gdp/atvps9a(d185n) Resolution 2.10 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	I	M	G	K	T	G	A	G	K	S	S	L	C	N	A	L	F	A	G	E	V	S	P	V	S	D	V	A	A	C	T	R	D	P	L	R	F	R	L	Q	I	G	E	H	F	M	T	I	V	D	L	P	G	V	G	E	S	G	V	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P	R	L	D	L
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template Sequence		K	L	V	L	L	G	D	V	G	A	G	K	S	S	L	V	L	R	F	V	A	A	F	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	T	L	A	V	N	D	A	T	V	K	F	E	I	W	D	T	A	G	Q	E	R	Y	H	S	L	A	P	M	Y	Y	.	.	.	.	.	R	G	A	A	A
Template Known Secondary structure									T	T	S	S														.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T													S	G	G	G	G	G	G						.	.	.	.	.	T	T		S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.															.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.						.	.	70	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		I	L	W	L	I	K	A	D	D	R	A	L	A	T	D	E	H	F	Y	R	Q	V	I	.	.	G	E	A	Y	R	H	K	M	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	N	I	L	S	T	E	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A	V
Query Conservation																									.	.
Alig confidence																									.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	I	V	F	D	V	T	N	Q	A	S	F	E	R	A	K	K	W	V	Q	E	L	Q	A	Q	G	N	P	N	M	V	M	A	L	A	G	N	K	S	D	L	L	D	A	R	K	V	T	A	E	D	A	Q	T	Y	A	Q	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	F	F	M	E	T
Template Known Secondary structure								T	T																			S		T	T										T	T			T	T			S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.														.	.	.	.	150	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	R	L	Q	W	G	L	R	V	M	A	E	R	M	I	K	C	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	K	T	A	T	N	V	K	E	I	F	Y	E	I	A	R	R	L	P
Template Known Secondary structure			T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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