Job Description P52131 Confidence 99.50% Date Thu Jan 5 12:05:36 GMT 2012 Rank 99 Aligned Residues 158 % Identity 22% Template c2dwqB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:gtp-binding protein; PDBTitle: thermus thermophilus ychf gtp-binding protein Resolution 2.95 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.													.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	I	G	I	M	G	K	T	G	A	G	K	S	S	L	C	N	A	L	F	A	G	E	V	S	P	V	S	D	V	A	A	C	T	R	D	P	L	R	F	.	.	.	.	.	.	.	.	.	.	.	.	R	L	Q	I	G	E	H	F	M	T	I	V	D	L	P	G	V	G	E	S	G	V	R	D	T	E	Y
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.																.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																											.																																														.	.	.	.	.	.	.	.	.
Template Sequence		L	A	V	G	I	V	G	L	P	N	V	G	K	S	T	L	F	N	A	L	T	R	A	N	A	.	L	A	K	N	V	G	V	V	P	L	E	D	E	R	L	Y	A	L	Q	R	T	F	A	K	G	E	R	V	P	P	V	V	P	T	H	V	E	F	V	D	I	A	G	L	V	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S	S	S													T	.																						T		B	T	T	B														T	T	T	T		.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																											.																																														.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	A	L	Y	R	E	Q	L	P	R	L	D	L	I	L	W	L	I	K	A	D	D	R	A	L	A	T	D	E	H	F	Y	R	Q	V	I	G	E	A	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.
Template Sequence		.	N	Q	F	L	A	H	I	R	E	V	A	A	I	A	H	V	L	R	C	F	P	D	P	L	E	D	A	E	V	V	E	T	E	L	L	L	A	D	L	A	T	L	E	R	R	L	E	R	L	R	K	E	A	R	A	D	R	E	R	L	P	L	L	E	A	A	E	G	L	Y	V	H	L	Q	E	G	K	P	A
Template Known Secondary structure		.										S	S																																													S	G	G	G																T	T			G
Template Predicted Secondary structure		.
Template SS confidence
			91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
																						145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	H	K	M	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	N	I	L	S	T	E	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C	A	V	S	V	R	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	F	P	P	S	E	A	V	A	R	F	L	K	E	T	P	L	L	T	A	K	P	V	I	Y	V	A	N	V	A	E	E	D	L	P	D	G	R	G	N	.	.	.	.	.	.	.	.	.	.	P	Q	V	E	A	V	R	R	K	A	L	E	E	G	A	E	V	V	V	V	S	A	R	L	E	A	E	L	A
Template Known Secondary structure		G	G	S				S	S	T	T						S			G	G	G	S										T	T	T	T	T	T	T	T	T		.	.	.	.	.	.	.	.	.	.														T		B												T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.											.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
																		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	W	G	L	R	V	M	A	E	R	M	I	K	C	L	P
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	L	S	G	E	E	A	R	E	L	L	A	A	Y	G	L	Q	E	S	G	L	Q	R	L	A	R	A	G	Y	R	A	L	D
Template Known Secondary structure		T	S	T											T	T		S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions