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Job DescriptionP52131
Confidence98.00%DateThu Jan 5 12:05:36 GMT 2012
Rank289Aligned Residues170
% Identity16%Templatec2bcjQ_
PDB info PDB header:transferase/hydrolaseChain: Q: PDB Molecule:g alpha i1, guanine nucleotide-binding protein g(q), alpha PDBTitle: crystal structure of g protein-coupled receptor kinase 2 in complex2 with galpha-q and gbetagamma subunits
Resolution3.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.......
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Query Sequence  VIGIMGKTGAGKSSLCNALF. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KLLLLGTGESGKSTFIKQMRIIHGSGYSDEDKRGFTKLVYQNIFTAMQAMIRAMDTLKIPYKYEHNKAHAQLVREVDVEK
Template Known Secondary structure  STTSSTSS


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   41........50.........60.........70.........80.........90.........100.........110.........120
 
   58.60...... ...70.........80.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . AGEVSPVSD. . . . VAACTRDPLRFRLQIGEHF
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Template Sequence  VSAFENPYVDAIKSLWNDPGIQECYDRRREYQLSDSTKYYLNDLDRVADPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVI
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   121........130.........140.........150.........160.........170.........180.........190.........200
 
   86...90.........100.........110.........120...... ...130.........140 .........150..
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Query Sequence  MTIVDLPGVGESGVRDTEYAALYREQLPRLDLILWLIKADD. . . . . . . . . . . RALATDEHFYRQVI. . GEAYRHKMLFVI
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Template Sequence  FRMVDVGG. . . . . . . QRSERRKWIHCFENVTSIMFLVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFL
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.......STTGGGGGGGG
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SGGGGG
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   201....... .210.........220.........230.........240.........250.........260.........270...
 
   153..... .160.........170.........180.........190.........200.........210....
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Query Sequence  SQSDKA. . . . . . . . . . . . . EPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMAERMIKCL
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Template Sequence  NKKDLLEEKIMYSHLVDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI
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   274.....280.........290.........300.........310.........320.........330.........340........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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