Job Description P52131 Confidence 99.75% Date Thu Jan 5 12:05:36 GMT 2012 Rank 35 Aligned Residues 160 % Identity 19% Template c1zo1I_ PDB info PDB header:translation/rna Chain: I: PDB Molecule:translation initiation factor 2; PDBTitle: if2, if1, and trna fitted to cryo-em data of e. coli 70s2 initiation complex Resolution 13.80 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	E	P	V	I	G	I	M	G	K	T	G	A	G	K	S	S	L	C	N	A	L	F	A	G	E	V	S	P	V	S	D	V	A	A	C	T	R	D	P	L	R	F	R	L	Q	I	G	E	H	F	M	T	I	V	D	L	P	G	V	G	E	S	G	V	R	D	T	E	Y	A	A	L	Y	R	E	Q	L	P
Query Conservation
Alig confidence																														.																																.	.	.	.	.	.	.
Template Conservation																														.																																.	.	.	.	.	.	.
Template Sequence		P	R	A	P	V	V	T	I	M	G	H	V	D	H	G	K	T	S	L	L	E	Y	I	R	S	T	K	V	.	A	S	G	E	A	G	G	I	T	Q	H	I	G	A	Y	H	V	E	T	E	N	G	M	I	T	F	L	D	T	P	G	.	.	.	.	.	.	.	H	A	A	F	T	S	M	R	A	R	G	A	Q
Template Known Secondary structure												S	T	T	S	S	S													.	S	B	T	T	B							S	S						T	T	S	S									T	.	.	.	.	.	.	.	T	T			T	T	S	B		S	S	S	B
Template Predicted Secondary structure																														.																																.	.	.	.	.	.	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.								.	.	.	.	.	.	290	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	D	L	I	L	W	L	I	K	A	D	D	R	A	L	A	T	D	E	H	F	Y	R	Q	V	I	G	E	A	Y	R	H	K	M	L	F	V	I	S	Q	S	D	K	A	E	P	T	S	G	G	N	I	L	S	T	E	Q	K	Q	N	I	S	R	K	I	C	L	L	H	E	L	F	Q	P	V	H	P	V	C
Query Conservation
Alig confidence																																.	.															.	.	.	.	.	.	.
Template Conservation																																.	.															.	.	.	.	.	.	.
Template Sequence		A	T	D	I	V	V	L	V	V	A	A	D	D	G	V	M	P	Q	T	I	E	A	I	Q	H	A	K	A	A	Q	.	.	V	P	V	V	V	A	V	N	K	I	D	K	P	E	.	.	.	.	.	.	.	A	D	P	D	R	V	K	N	E	L	S	Q	Y	G	I	L	P	E	E	W	G	G	E	S	Q	F	V
Template Known Secondary structure		S		S	S							T	T	T	B	S		T	T	T										T	T	.	.										S	S	S	S	T	.	.	.	.	.	.	.	T					T	T										T	T			S	S	S
Template Predicted Secondary structure																																.	.															.	.	.	.	.	.	.
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340								.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	S	V	R	L	Q	W	G	L	R	V	M	A	E	R	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	V	S	A	K	A	G	T	G	I	D	E	L	L	D	A	I
Template Known Secondary structure					T	T	T		T	T		T	T					T
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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