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Job DescriptionP52131
Confidence96.78%DateThu Jan 5 12:05:36 GMT 2012
Rank403Aligned Residues182
% Identity13%Templatec1ii0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:arsenical pump-driving atpase; PDBTitle: crystal structure of the escherichia coli arsenite-translocating2 atpase
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   25....30.........40.. .......50....... ..60.........70.......
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Query Sequence  ILQQINQLTHYEPVIGIM. GKTGAGKSSLCNALF. . . . . . AGEVSPVSDVAACTRDPLRF. . . . . . . . . . . . . . . . . . . .
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Template Sequence  LSALVDDIARNEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPALNNLQVSRIDPHEETERYRQHVLETKGK
Template Known Secondary structure  TTS

STTSSTT

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TT

TGG
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   315....320.........330.........340.........350.........360.........370.........380.........390....
 
   78.80.........90.........100.........110.........120.......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RLQIGEHFMTIVDLPGVGESGVRDTEYAALYREQLPRLDLILWLIKADDR
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Template Sequence  ELDEAGKRLLEEDLRSPCTEEIAVFQAFSRVIREAGKRFVVMDTAPTGHTLLLLDATTTPMMLLQDPERTKVLLVTLPET
Template Known Secondary structure  G

TTSTTTGGGGGTSS








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   405....410.........420.........430.........440.........450.........460.........470.........480....
 
   128.130.........140.........150.........160.........170.........180.........190.........200.......
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Query Sequence  ALATDEHFYRQVIGEAYRHKMLFVISQSDKAEPTSGGNILSTEQKQNISRKICLLHELFQPVHPVCAVSVRLQWGLRVMA
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Template Sequence  TPVLEAANLQADLERAGIHPWGWIINNS. . LSIADTRSPLLRMRAQQELPQIESVKRQHASRVALVPVLASEPTGIDKLK
Template Known Secondary structure  TT



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   502.......510.........520......... 530.........540.........550.........560.........570.........
 
   208
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Query Sequence  E
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Template Sequence  Q
Template Known Secondary structure 
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   580
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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